Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  18491141 5.A F Gene expression analysis (transcription) : Semi-quantitative RT-PCR  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0000001[#] PO:0020031[#] MCP:1000107[#] # # 2  
  1 2 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0005052[#] # # 0  
  1 3 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0009010[#] PO:0007022[72h] # # 0  
  1 4 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0009005[#] PO:0009025[#] PO:0007106[#] # # 1  
  1 5 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0009006[#] PO:0007071[#] # # 0  
  1 6 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0009005[#] PO:0007071[#] # # 1  
  1 7 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0009047[#] PO:0009047[#] MCP:1000136[#] # # 0  
  1 8 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0020103[#] PO:0009047[#] MCP:1000136[#] # # 1  
  1 9 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0009047[#] PO:0007041[#] # # 1  
  1 10 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0009049[#] PO:0007041[#] # # 1  
  1 11 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0020103[#] MCP:1000201[#] # # 1  
  1 12 LOC_Os01g07376 # # 39946 CU:086 # WT # MCP:1000250[#] # # 1  
  1 13 LOC_Os01g07376 # # 39946 CU:086 # WT # MCP:1000250[#] # # 1  
  1 14 LOC_Os01g07376 # # 39946 CU:086 # WT # MCP:1000250[#] # # 0  
  1 15 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0009025[#] MCP:1000194[#] # # 1  
  1 16 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0020104[#] MCP:1000194[#] # # 1  
  1 17 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0009049[#] MCP:1000194[#] # # 1  
  1 18 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0006000[#] MCP:1000110[#] # # 1  
  1 19 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0009029[#] MCP:1000110[#] # # 1  
  1 20 LOC_Os01g07376 # # 39946 CU:086 # WT # PO:0009051[#] MCP:1000489[#] # # 2  
 
LOC_Os01g07376-thioredoxin, putative, expressed
39946-Oryza sativa (indica group)
CU:086-cv. Minghui 63
WT-Wild Type
h-Hours
MCP:1000107-post-germination stage
MCP:1000110-1 day pre-heading stage
MCP:1000136-5 days pre-heading stage
MCP:1000194-inflorescence 4-5cm stage
MCP:1000201-14 days post-heading stage
MCP:1000250-inflorescenece secondary branch primordium differentiation stage
MCP:1000489-3 days post-anthesis stage
PO:0000001-embryo proper
PO:0005052-plant callus
PO:0006000-Poaceae hull
PO:0007022-imbibition
PO:0007041-inflorescence emergence from flag leaf sheath
PO:0007071-2.02 main shoot and axillary shoots visible at two nodes
PO:0007106-LP.03 three leaves visible
PO:0009005-root
PO:0009006-shoot system
PO:0009010-seed
PO:0009025-vascular leaf
PO:0009029-stamen
PO:0009047-stem
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0020031-radicle
PO:0020103-flag leaf
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0000001[#] PO:0020031[#] MCP:1000107[#] # # 4  
  2 2 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0005052[#] # # 3  
  2 3 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0009010[#] PO:0007022[72h] # # 2  
  2 4 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0009005[#] PO:0009025[#] PO:0007106[#] # # 3  
  2 5 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0009006[#] PO:0007071[#] # # 3  
  2 6 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0009005[#] PO:0007071[#] # # 2  
  2 7 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0009047[#] PO:0009047[#] MCP:1000136[#] # # 3  
  2 8 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0020103[#] PO:0009047[#] MCP:1000136[#] # # 2  
  2 9 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0009047[#] PO:0007041[#] # # 3  
  2 10 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0009049[#] PO:0007041[#] # # 3  
  2 11 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0020103[#] MCP:1000201[#] # # 1  
  2 12 LOC_Os01g23740 # # 39946 CU:086 # WT # MCP:1000250[#] # # 3  
  2 13 LOC_Os01g23740 # # 39946 CU:086 # WT # MCP:1000250[#] # # 4  
  2 14 LOC_Os01g23740 # # 39946 CU:086 # WT # MCP:1000250[#] # # 4  
  2 15 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0009025[#] MCP:1000194[#] # # 2  
  2 16 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0020104[#] MCP:1000194[#] # # 3  
  2 17 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0009049[#] MCP:1000194[#] # # 2  
  2 18 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0006000[#] MCP:1000110[#] # # 3  
  2 19 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0009029[#] MCP:1000110[#] # # 4  
  2 20 LOC_Os01g23740 # # 39946 CU:086 # WT # PO:0009051[#] MCP:1000489[#] # # 3  
 
LOC_Os01g23740-OsPDIL2-2 protein disulfide isomerase PDIL2-2, expressed
39946-Oryza sativa (indica group)
CU:086-cv. Minghui 63
WT-Wild Type
h-Hours
MCP:1000107-post-germination stage
MCP:1000110-1 day pre-heading stage
MCP:1000136-5 days pre-heading stage
MCP:1000194-inflorescence 4-5cm stage
MCP:1000201-14 days post-heading stage
MCP:1000250-inflorescenece secondary branch primordium differentiation stage
MCP:1000489-3 days post-anthesis stage
PO:0000001-embryo proper
PO:0005052-plant callus
PO:0006000-Poaceae hull
PO:0007022-imbibition
PO:0007041-inflorescence emergence from flag leaf sheath
PO:0007071-2.02 main shoot and axillary shoots visible at two nodes
PO:0007106-LP.03 three leaves visible
PO:0009005-root
PO:0009006-shoot system
PO:0009010-seed
PO:0009025-vascular leaf
PO:0009029-stamen
PO:0009047-stem
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0020031-radicle
PO:0020103-flag leaf
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0000001[#] PO:0020031[#] MCP:1000107[#] # # 2  
  3 2 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0005052[#] # # 0  
  3 3 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0009010[#] PO:0007022[72h] # # 0  
  3 4 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0009005[#] PO:0009025[#] PO:0007106[#] # # 1  
  3 5 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0009006[#] PO:0007071[#] # # 1  
  3 6 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0009005[#] PO:0007071[#] # # 0  
  3 7 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0009047[#] PO:0009047[#] MCP:1000136[#] # # 0  
  3 8 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0020103[#] PO:0009047[#] MCP:1000136[#] # # 2  
  3 9 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0009047[#] PO:0007041[#] # # 2  
  3 10 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0009049[#] PO:0007041[#] # # 2  
  3 11 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0020103[#] MCP:1000201[#] # # 2  
  3 12 LOC_Os01g68480 # # 39946 CU:086 # WT # MCP:1000250[#] # # 2  
  3 13 LOC_Os01g68480 # # 39946 CU:086 # WT # MCP:1000250[#] # # 2  
  3 14 LOC_Os01g68480 # # 39946 CU:086 # WT # MCP:1000250[#] # # 2  
  3 15 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0009025[#] MCP:1000194[#] # # 3  
  3 16 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0020104[#] MCP:1000194[#] # # 3  
  3 17 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0009049[#] MCP:1000194[#] # # 3  
  3 18 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0006000[#] MCP:1000110[#] # # 3  
  3 19 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0009029[#] MCP:1000110[#] # # 3  
  3 20 LOC_Os01g68480 # # 39946 CU:086 # WT # PO:0009051[#] MCP:1000489[#] # # 3  
 
LOC_Os01g68480-thioredoxin, putative, expressed
39946-Oryza sativa (indica group)
CU:086-cv. Minghui 63
WT-Wild Type
h-Hours
MCP:1000107-post-germination stage
MCP:1000110-1 day pre-heading stage
MCP:1000136-5 days pre-heading stage
MCP:1000194-inflorescence 4-5cm stage
MCP:1000201-14 days post-heading stage
MCP:1000250-inflorescenece secondary branch primordium differentiation stage
MCP:1000489-3 days post-anthesis stage
PO:0000001-embryo proper
PO:0005052-plant callus
PO:0006000-Poaceae hull
PO:0007022-imbibition
PO:0007041-inflorescence emergence from flag leaf sheath
PO:0007071-2.02 main shoot and axillary shoots visible at two nodes
PO:0007106-LP.03 three leaves visible
PO:0009005-root
PO:0009006-shoot system
PO:0009010-seed
PO:0009025-vascular leaf
PO:0009029-stamen
PO:0009047-stem
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0020031-radicle
PO:0020103-flag leaf
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0000001[#] PO:0020031[#] MCP:1000107[#] # # 0  
  4 2 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0005052[#] # # 0  
  4 3 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0009010[#] PO:0007022[72h] # # 0  
  4 4 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0009005[#] PO:0009025[#] PO:0007106[#] # # 0  
  4 5 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0009006[#] PO:0007071[#] # # 3  
  4 6 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0009005[#] PO:0007071[#] # # 2  
  4 7 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0009047[#] PO:0009047[#] MCP:1000136[#] # # 2  
  4 8 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0020103[#] PO:0009047[#] MCP:1000136[#] # # 3  
  4 9 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0009047[#] PO:0007041[#] # # 2  
  4 10 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0009049[#] PO:0007041[#] # # 3  
  4 11 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0020103[#] MCP:1000201[#] # # 0  
  4 12 LOC_Os01g73234 # # 39946 CU:086 # WT # MCP:1000250[#] # # 0  
  4 13 LOC_Os01g73234 # # 39946 CU:086 # WT # MCP:1000250[#] # # 1  
  4 14 LOC_Os01g73234 # # 39946 CU:086 # WT # MCP:1000250[#] # # 3  
  4 15 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0009025[#] MCP:1000194[#] # # 3  
  4 16 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0020104[#] MCP:1000194[#] # # 2  
  4 17 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0009049[#] MCP:1000194[#] # # 3  
  4 18 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0006000[#] MCP:1000110[#] # # 3  
  4 19 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0009029[#] MCP:1000110[#] # # 3  
  4 20 LOC_Os01g73234 # # 39946 CU:086 # WT # PO:0009051[#] MCP:1000489[#] # # 0  
 
LOC_Os01g73234-thioredoxin, putative, expressed
39946-Oryza sativa (indica group)
CU:086-cv. Minghui 63
WT-Wild Type
h-Hours
MCP:1000107-post-germination stage
MCP:1000110-1 day pre-heading stage
MCP:1000136-5 days pre-heading stage
MCP:1000194-inflorescence 4-5cm stage
MCP:1000201-14 days post-heading stage
MCP:1000250-inflorescenece secondary branch primordium differentiation stage
MCP:1000489-3 days post-anthesis stage
PO:0000001-embryo proper
PO:0005052-plant callus
PO:0006000-Poaceae hull
PO:0007022-imbibition
PO:0007041-inflorescence emergence from flag leaf sheath
PO:0007071-2.02 main shoot and axillary shoots visible at two nodes
PO:0007106-LP.03 three leaves visible
PO:0009005-root
PO:0009006-shoot system
PO:0009010-seed
PO:0009025-vascular leaf
PO:0009029-stamen
PO:0009047-stem
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0020031-radicle
PO:0020103-flag leaf
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  5 1 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0000001[#] PO:0020031[#] MCP:1000107[#] # # #  
  5 2 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0005052[#] # # #  
  5 3 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0009010[#] PO:0007022[72h] # # #  
  5 4 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0009005[#] PO:0009025[#] PO:0007106[#] # # #  
  5 5 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0009006[#] PO:0007071[#] # # #  
  5 6 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0009005[#] PO:0007071[#] # # #  
  5 7 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0009047[#] PO:0009047[#] MCP:1000136[#] # # #  
  5 8 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0020103[#] PO:0009047[#] MCP:1000136[#] # # #  
  5 9 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0009047[#] PO:0007041[#] # # #  
  5 10 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0009049[#] PO:0007041[#] # # #  
  5 11 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0020103[#] MCP:1000201[#] # # #  
  5 12 LOC_Os02g01010 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  5 13 LOC_Os02g01010 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  5 14 LOC_Os02g01010 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  5 15 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0009025[#] MCP:1000194[#] # # #  
  5 16 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0020104[#] MCP:1000194[#] # # #  
  5 17 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0009049[#] MCP:1000194[#] # # #  
  5 18 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0006000[#] MCP:1000110[#] # # #  
  5 19 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0009029[#] MCP:1000110[#] # # #  
  5 20 LOC_Os02g01010 # # 39946 CU:086 # WT # PO:0009051[#] MCP:1000489[#] # # #  
 
LOC_Os02g01010-OsPDIL1-4 protein disulfide isomerase PDIL1-4, expressed
39946-Oryza sativa (indica group)
CU:086-cv. Minghui 63
WT-Wild Type
h-Hours
MCP:1000107-post-germination stage
MCP:1000110-1 day pre-heading stage
MCP:1000136-5 days pre-heading stage
MCP:1000194-inflorescence 4-5cm stage
MCP:1000201-14 days post-heading stage
MCP:1000250-inflorescenece secondary branch primordium differentiation stage
MCP:1000489-3 days post-anthesis stage
PO:0000001-embryo proper
PO:0005052-plant callus
PO:0006000-Poaceae hull
PO:0007022-imbibition
PO:0007041-inflorescence emergence from flag leaf sheath
PO:0007071-2.02 main shoot and axillary shoots visible at two nodes
PO:0007106-LP.03 three leaves visible
PO:0009005-root
PO:0009006-shoot system
PO:0009010-seed
PO:0009025-vascular leaf
PO:0009029-stamen
PO:0009047-stem
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0020031-radicle
PO:0020103-flag leaf
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  6 1 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0000001[#] PO:0020031[#] MCP:1000107[#] # # #  
  6 2 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0005052[#] # # #  
  6 3 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0009010[#] PO:0007022[72h] # # #  
  6 4 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0009005[#] PO:0009025[#] PO:0007106[#] # # #  
  6 5 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0009006[#] PO:0007071[#] # # #  
  6 6 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0009005[#] PO:0007071[#] # # #  
  6 7 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0009047[#] PO:0009047[#] MCP:1000136[#] # # #  
  6 8 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0020103[#] PO:0009047[#] MCP:1000136[#] # # #  
  6 9 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0009047[#] PO:0007041[#] # # #  
  6 10 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0009049[#] PO:0007041[#] # # #  
  6 11 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0020103[#] MCP:1000201[#] # # #  
  6 12 LOC_Os02g34530 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  6 13 LOC_Os02g34530 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  6 14 LOC_Os02g34530 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  6 15 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0009025[#] MCP:1000194[#] # # #  
  6 16 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0020104[#] MCP:1000194[#] # # #  
  6 17 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0009049[#] MCP:1000194[#] # # #  
  6 18 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0006000[#] MCP:1000110[#] # # #  
  6 19 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0009029[#] MCP:1000110[#] # # #  
  6 20 LOC_Os02g34530 # # 39946 CU:086 # WT # PO:0009051[#] MCP:1000489[#] # # #  
 
LOC_Os02g34530-OsPDIL5-3 protein disulfide isomerase PDIL5-3, expressed
39946-Oryza sativa (indica group)
CU:086-cv. Minghui 63
WT-Wild Type
h-Hours
MCP:1000107-post-germination stage
MCP:1000110-1 day pre-heading stage
MCP:1000136-5 days pre-heading stage
MCP:1000194-inflorescence 4-5cm stage
MCP:1000201-14 days post-heading stage
MCP:1000250-inflorescenece secondary branch primordium differentiation stage
MCP:1000489-3 days post-anthesis stage
PO:0000001-embryo proper
PO:0005052-plant callus
PO:0006000-Poaceae hull
PO:0007022-imbibition
PO:0007041-inflorescence emergence from flag leaf sheath
PO:0007071-2.02 main shoot and axillary shoots visible at two nodes
PO:0007106-LP.03 three leaves visible
PO:0009005-root
PO:0009006-shoot system
PO:0009010-seed
PO:0009025-vascular leaf
PO:0009029-stamen
PO:0009047-stem
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0020031-radicle
PO:0020103-flag leaf
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  7 1 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0000001[#] PO:0020031[#] MCP:1000107[#] # # #  
  7 2 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0005052[#] # # #  
  7 3 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0009010[#] PO:0007022[72h] # # #  
  7 4 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0009005[#] PO:0009025[#] PO:0007106[#] # # #  
  7 5 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0009006[#] PO:0007071[#] # # #  
  7 6 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0009005[#] PO:0007071[#] # # #  
  7 7 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0009047[#] PO:0009047[#] MCP:1000136[#] # # #  
  7 8 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0020103[#] PO:0009047[#] MCP:1000136[#] # # #  
  7 9 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0009047[#] PO:0007041[#] # # #  
  7 10 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0009049[#] PO:0007041[#] # # #  
  7 11 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0020103[#] MCP:1000201[#] # # #  
  7 12 LOC_Os02g34940 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  7 13 LOC_Os02g34940 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  7 14 LOC_Os02g34940 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  7 15 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0009025[#] MCP:1000194[#] # # #  
  7 16 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0020104[#] MCP:1000194[#] # # #  
  7 17 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0009049[#] MCP:1000194[#] # # #  
  7 18 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0006000[#] MCP:1000110[#] # # #  
  7 19 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0009029[#] MCP:1000110[#] # # #  
  7 20 LOC_Os02g34940 # # 39946 CU:086 # WT # PO:0009051[#] MCP:1000489[#] # # #  
 
LOC_Os02g34940-OsPDIL1-3 protein disulfide isomerase PDIL1-3, expressed
39946-Oryza sativa (indica group)
CU:086-cv. Minghui 63
WT-Wild Type
h-Hours
MCP:1000107-post-germination stage
MCP:1000110-1 day pre-heading stage
MCP:1000136-5 days pre-heading stage
MCP:1000194-inflorescence 4-5cm stage
MCP:1000201-14 days post-heading stage
MCP:1000250-inflorescenece secondary branch primordium differentiation stage
MCP:1000489-3 days post-anthesis stage
PO:0000001-embryo proper
PO:0005052-plant callus
PO:0006000-Poaceae hull
PO:0007022-imbibition
PO:0007041-inflorescence emergence from flag leaf sheath
PO:0007071-2.02 main shoot and axillary shoots visible at two nodes
PO:0007106-LP.03 three leaves visible
PO:0009005-root
PO:0009006-shoot system
PO:0009010-seed
PO:0009025-vascular leaf
PO:0009029-stamen
PO:0009047-stem
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0020031-radicle
PO:0020103-flag leaf
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  8 1 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0000001[#] PO:0020031[#] MCP:1000107[#] # # #  
  8 2 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0005052[#] # # #  
  8 3 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0009010[#] PO:0007022[72h] # # #  
  8 4 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0009005[#] PO:0009025[#] PO:0007106[#] # # #  
  8 5 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0009006[#] PO:0007071[#] # # #  
  8 6 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0009005[#] PO:0007071[#] # # #  
  8 7 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0009047[#] PO:0009047[#] MCP:1000136[#] # # #  
  8 8 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0020103[#] PO:0009047[#] MCP:1000136[#] # # #  
  8 9 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0009047[#] PO:0007041[#] # # #  
  8 10 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0009049[#] PO:0007041[#] # # #  
  8 11 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0020103[#] MCP:1000201[#] # # #  
  8 12 LOC_Os03g17860 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  8 13 LOC_Os03g17860 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  8 14 LOC_Os03g17860 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  8 15 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0009025[#] MCP:1000194[#] # # #  
  8 16 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0020104[#] MCP:1000194[#] # # #  
  8 17 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0009049[#] MCP:1000194[#] # # #  
  8 18 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0006000[#] MCP:1000110[#] # # #  
  8 19 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0009029[#] MCP:1000110[#] # # #  
  8 20 LOC_Os03g17860 # # 39946 CU:086 # WT # PO:0009051[#] MCP:1000489[#] # # #  
 
LOC_Os03g17860-OsPDIL5-1 protein disulfide isomerase PDIL5-1, expressed
39946-Oryza sativa (indica group)
CU:086-cv. Minghui 63
WT-Wild Type
h-Hours
MCP:1000107-post-germination stage
MCP:1000110-1 day pre-heading stage
MCP:1000136-5 days pre-heading stage
MCP:1000194-inflorescence 4-5cm stage
MCP:1000201-14 days post-heading stage
MCP:1000250-inflorescenece secondary branch primordium differentiation stage
MCP:1000489-3 days post-anthesis stage
PO:0000001-embryo proper
PO:0005052-plant callus
PO:0006000-Poaceae hull
PO:0007022-imbibition
PO:0007041-inflorescence emergence from flag leaf sheath
PO:0007071-2.02 main shoot and axillary shoots visible at two nodes
PO:0007106-LP.03 three leaves visible
PO:0009005-root
PO:0009006-shoot system
PO:0009010-seed
PO:0009025-vascular leaf
PO:0009029-stamen
PO:0009047-stem
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0020031-radicle
PO:0020103-flag leaf
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  9 1 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0000001[#] PO:0020031[#] MCP:1000107[#] # # #  
  9 2 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0005052[#] # # #  
  9 3 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0009010[#] PO:0007022[72h] # # #  
  9 4 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0009005[#] PO:0009025[#] PO:0007106[#] # # #  
  9 5 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0009006[#] PO:0007071[#] # # #  
  9 6 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0009005[#] PO:0007071[#] # # #  
  9 7 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0009047[#] PO:0009047[#] MCP:1000136[#] # # #  
  9 8 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0020103[#] PO:0009047[#] MCP:1000136[#] # # #  
  9 9 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0009047[#] PO:0007041[#] # # #  
  9 10 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0009049[#] PO:0007041[#] # # #  
  9 11 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0020103[#] MCP:1000201[#] # # #  
  9 12 LOC_Os04g35600 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  9 13 LOC_Os04g35600 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  9 14 LOC_Os04g35600 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  9 15 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0009025[#] MCP:1000194[#] # # #  
  9 16 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0020104[#] MCP:1000194[#] # # #  
  9 17 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0009049[#] MCP:1000194[#] # # #  
  9 18 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0006000[#] MCP:1000110[#] # # #  
  9 19 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0009029[#] MCP:1000110[#] # # #  
  9 20 LOC_Os04g35600 # # 39946 CU:086 # WT # PO:0009051[#] MCP:1000489[#] # # #  
 
LOC_Os04g35600-OsPDIL1-2 protein disulfide isomerase PDIL1-2, expressed
39946-Oryza sativa (indica group)
CU:086-cv. Minghui 63
WT-Wild Type
h-Hours
MCP:1000107-post-germination stage
MCP:1000110-1 day pre-heading stage
MCP:1000136-5 days pre-heading stage
MCP:1000194-inflorescence 4-5cm stage
MCP:1000201-14 days post-heading stage
MCP:1000250-inflorescenece secondary branch primordium differentiation stage
MCP:1000489-3 days post-anthesis stage
PO:0000001-embryo proper
PO:0005052-plant callus
PO:0006000-Poaceae hull
PO:0007022-imbibition
PO:0007041-inflorescence emergence from flag leaf sheath
PO:0007071-2.02 main shoot and axillary shoots visible at two nodes
PO:0007106-LP.03 three leaves visible
PO:0009005-root
PO:0009006-shoot system
PO:0009010-seed
PO:0009025-vascular leaf
PO:0009029-stamen
PO:0009047-stem
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0020031-radicle
PO:0020103-flag leaf
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  10 1 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0000001[#] PO:0020031[#] MCP:1000107[#] # # #  
  10 2 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0005052[#] # # #  
  10 3 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0009010[#] PO:0007022[72h] # # #  
  10 4 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0009005[#] PO:0009025[#] PO:0007106[#] # # #  
  10 5 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0009006[#] PO:0007071[#] # # #  
  10 6 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0009005[#] PO:0007071[#] # # #  
  10 7 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0009047[#] PO:0009047[#] MCP:1000136[#] # # #  
  10 8 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0020103[#] PO:0009047[#] MCP:1000136[#] # # #  
  10 9 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0009047[#] PO:0007041[#] # # #  
  10 10 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0009049[#] PO:0007041[#] # # #  
  10 11 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0020103[#] MCP:1000201[#] # # #  
  10 12 LOC_Os04g44830 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  10 13 LOC_Os04g44830 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  10 14 LOC_Os04g44830 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  10 15 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0009025[#] MCP:1000194[#] # # #  
  10 16 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0020104[#] MCP:1000194[#] # # #  
  10 17 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0009049[#] MCP:1000194[#] # # #  
  10 18 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0006000[#] MCP:1000110[#] # # #  
  10 19 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0009029[#] MCP:1000110[#] # # #  
  10 20 LOC_Os04g44830 # # 39946 CU:086 # WT # PO:0009051[#] MCP:1000489[#] # # #  
 
LOC_Os04g44830-thioredoxin, putative, expressed
39946-Oryza sativa (indica group)
CU:086-cv. Minghui 63
WT-Wild Type
h-Hours
MCP:1000107-post-germination stage
MCP:1000110-1 day pre-heading stage
MCP:1000136-5 days pre-heading stage
MCP:1000194-inflorescence 4-5cm stage
MCP:1000201-14 days post-heading stage
MCP:1000250-inflorescenece secondary branch primordium differentiation stage
MCP:1000489-3 days post-anthesis stage
PO:0000001-embryo proper
PO:0005052-plant callus
PO:0006000-Poaceae hull
PO:0007022-imbibition
PO:0007041-inflorescence emergence from flag leaf sheath
PO:0007071-2.02 main shoot and axillary shoots visible at two nodes
PO:0007106-LP.03 three leaves visible
PO:0009005-root
PO:0009006-shoot system
PO:0009010-seed
PO:0009025-vascular leaf
PO:0009029-stamen
PO:0009047-stem
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0020031-radicle
PO:0020103-flag leaf
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  11 1 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0000001[#] PO:0020031[#] MCP:1000107[#] # # #  
  11 2 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0005052[#] # # #  
  11 3 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0009010[#] PO:0007022[72h] # # #  
  11 4 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0009005[#] PO:0009025[#] PO:0007106[#] # # #  
  11 5 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0009006[#] PO:0007071[#] # # #  
  11 6 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0009005[#] PO:0007071[#] # # #  
  11 7 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0009047[#] PO:0009047[#] MCP:1000136[#] # # #  
  11 8 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0020103[#] PO:0009047[#] MCP:1000136[#] # # #  
  11 9 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0009047[#] PO:0007041[#] # # #  
  11 10 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0009049[#] PO:0007041[#] # # #  
  11 11 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0020103[#] MCP:1000201[#] # # #  
  11 12 LOC_Os05g06430 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  11 13 LOC_Os05g06430 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  11 14 LOC_Os05g06430 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  11 15 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0009025[#] MCP:1000194[#] # # #  
  11 16 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0020104[#] MCP:1000194[#] # # #  
  11 17 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0009049[#] MCP:1000194[#] # # #  
  11 18 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0006000[#] MCP:1000110[#] # # #  
  11 19 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0009029[#] MCP:1000110[#] # # #  
  11 20 LOC_Os05g06430 # # 39946 CU:086 # WT # PO:0009051[#] MCP:1000489[#] # # #  
 
LOC_Os05g06430-OsPDIL2-1 protein disulfide isomerase PDIL2-1, expressed
39946-Oryza sativa (indica group)
CU:086-cv. Minghui 63
WT-Wild Type
h-Hours
MCP:1000107-post-germination stage
MCP:1000110-1 day pre-heading stage
MCP:1000136-5 days pre-heading stage
MCP:1000194-inflorescence 4-5cm stage
MCP:1000201-14 days post-heading stage
MCP:1000250-inflorescenece secondary branch primordium differentiation stage
MCP:1000489-3 days post-anthesis stage
PO:0000001-embryo proper
PO:0005052-plant callus
PO:0006000-Poaceae hull
PO:0007022-imbibition
PO:0007041-inflorescence emergence from flag leaf sheath
PO:0007071-2.02 main shoot and axillary shoots visible at two nodes
PO:0007106-LP.03 three leaves visible
PO:0009005-root
PO:0009006-shoot system
PO:0009010-seed
PO:0009025-vascular leaf
PO:0009029-stamen
PO:0009047-stem
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0020031-radicle
PO:0020103-flag leaf
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  12 1 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0000001[#] PO:0020031[#] MCP:1000107[#] # # #  
  12 2 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0005052[#] # # #  
  12 3 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0009010[#] PO:0007022[72h] # # #  
  12 4 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0009005[#] PO:0009025[#] PO:0007106[#] # # #  
  12 5 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0009006[#] PO:0007071[#] # # #  
  12 6 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0009005[#] PO:0007071[#] # # #  
  12 7 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0009047[#] PO:0009047[#] MCP:1000136[#] # # #  
  12 8 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0020103[#] PO:0009047[#] MCP:1000136[#] # # #  
  12 9 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0009047[#] PO:0007041[#] # # #  
  12 10 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0009049[#] PO:0007041[#] # # #  
  12 11 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0020103[#] MCP:1000201[#] # # #  
  12 12 LOC_Os05g07690 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  12 13 LOC_Os05g07690 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  12 14 LOC_Os05g07690 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  12 15 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0009025[#] MCP:1000194[#] # # #  
  12 16 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0020104[#] MCP:1000194[#] # # #  
  12 17 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0009049[#] MCP:1000194[#] # # #  
  12 18 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0006000[#] MCP:1000110[#] # # #  
  12 19 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0009029[#] MCP:1000110[#] # # #  
  12 20 LOC_Os05g07690 # # 39946 CU:086 # WT # PO:0009051[#] MCP:1000489[#] # # #  
 
LOC_Os05g07690-thioredoxin, putative, expressed
39946-Oryza sativa (indica group)
CU:086-cv. Minghui 63
WT-Wild Type
h-Hours
MCP:1000107-post-germination stage
MCP:1000110-1 day pre-heading stage
MCP:1000136-5 days pre-heading stage
MCP:1000194-inflorescence 4-5cm stage
MCP:1000201-14 days post-heading stage
MCP:1000250-inflorescenece secondary branch primordium differentiation stage
MCP:1000489-3 days post-anthesis stage
PO:0000001-embryo proper
PO:0005052-plant callus
PO:0006000-Poaceae hull
PO:0007022-imbibition
PO:0007041-inflorescence emergence from flag leaf sheath
PO:0007071-2.02 main shoot and axillary shoots visible at two nodes
PO:0007106-LP.03 three leaves visible
PO:0009005-root
PO:0009006-shoot system
PO:0009010-seed
PO:0009025-vascular leaf
PO:0009029-stamen
PO:0009047-stem
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0020031-radicle
PO:0020103-flag leaf
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  13 1 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0000001[#] PO:0020031[#] MCP:1000107[#] # # #  
  13 2 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0005052[#] # # #  
  13 3 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0009010[#] PO:0007022[72h] # # #  
  13 4 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0009005[#] PO:0009025[#] PO:0007106[#] # # #  
  13 5 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0009006[#] PO:0007071[#] # # #  
  13 6 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0009005[#] PO:0007071[#] # # #  
  13 7 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0009047[#] PO:0009047[#] MCP:1000136[#] # # #  
  13 8 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0020103[#] PO:0009047[#] MCP:1000136[#] # # #  
  13 9 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0009047[#] PO:0007041[#] # # #  
  13 10 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0009049[#] PO:0007041[#] # # #  
  13 11 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0020103[#] MCP:1000201[#] # # #  
  13 12 LOC_Os07g08840 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  13 13 LOC_Os07g08840 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  13 14 LOC_Os07g08840 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  13 15 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0009025[#] MCP:1000194[#] # # #  
  13 16 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0020104[#] MCP:1000194[#] # # #  
  13 17 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0009049[#] MCP:1000194[#] # # #  
  13 18 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0006000[#] MCP:1000110[#] # # #  
  13 19 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0009029[#] MCP:1000110[#] # # #  
  13 20 LOC_Os07g08840 # # 39946 CU:086 # WT # PO:0009051[#] MCP:1000489[#] # # #  
 
LOC_Os07g08840-thioredoxin, putative, expressed
39946-Oryza sativa (indica group)
CU:086-cv. Minghui 63
WT-Wild Type
h-Hours
MCP:1000107-post-germination stage
MCP:1000110-1 day pre-heading stage
MCP:1000136-5 days pre-heading stage
MCP:1000194-inflorescence 4-5cm stage
MCP:1000201-14 days post-heading stage
MCP:1000250-inflorescenece secondary branch primordium differentiation stage
MCP:1000489-3 days post-anthesis stage
PO:0000001-embryo proper
PO:0005052-plant callus
PO:0006000-Poaceae hull
PO:0007022-imbibition
PO:0007041-inflorescence emergence from flag leaf sheath
PO:0007071-2.02 main shoot and axillary shoots visible at two nodes
PO:0007106-LP.03 three leaves visible
PO:0009005-root
PO:0009006-shoot system
PO:0009010-seed
PO:0009025-vascular leaf
PO:0009029-stamen
PO:0009047-stem
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0020031-radicle
PO:0020103-flag leaf
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  14 1 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0000001[#] PO:0020031[#] MCP:1000107[#] # # #  
  14 2 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0005052[#] # # #  
  14 3 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0009010[#] PO:0007022[72h] # # #  
  14 4 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0009005[#] PO:0009025[#] PO:0007106[#] # # #  
  14 5 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0009006[#] PO:0007071[#] # # #  
  14 6 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0009005[#] PO:0007071[#] # # #  
  14 7 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0009047[#] PO:0009047[#] MCP:1000136[#] # # #  
  14 8 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0020103[#] PO:0009047[#] MCP:1000136[#] # # #  
  14 9 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0009047[#] PO:0007041[#] # # #  
  14 10 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0009049[#] PO:0007041[#] # # #  
  14 11 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0020103[#] MCP:1000201[#] # # #  
  14 12 LOC_Os08g29110 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  14 13 LOC_Os08g29110 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  14 14 LOC_Os08g29110 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  14 15 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0009025[#] MCP:1000194[#] # # #  
  14 16 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0020104[#] MCP:1000194[#] # # #  
  14 17 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0009049[#] MCP:1000194[#] # # #  
  14 18 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0006000[#] MCP:1000110[#] # # #  
  14 19 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0009029[#] MCP:1000110[#] # # #  
  14 20 LOC_Os08g29110 # # 39946 CU:086 # WT # PO:0009051[#] MCP:1000489[#] # # #  
 
LOC_Os08g29110-thioredoxin, putative, expressed
39946-Oryza sativa (indica group)
CU:086-cv. Minghui 63
WT-Wild Type
h-Hours
MCP:1000107-post-germination stage
MCP:1000110-1 day pre-heading stage
MCP:1000136-5 days pre-heading stage
MCP:1000194-inflorescence 4-5cm stage
MCP:1000201-14 days post-heading stage
MCP:1000250-inflorescenece secondary branch primordium differentiation stage
MCP:1000489-3 days post-anthesis stage
PO:0000001-embryo proper
PO:0005052-plant callus
PO:0006000-Poaceae hull
PO:0007022-imbibition
PO:0007041-inflorescence emergence from flag leaf sheath
PO:0007071-2.02 main shoot and axillary shoots visible at two nodes
PO:0007106-LP.03 three leaves visible
PO:0009005-root
PO:0009006-shoot system
PO:0009010-seed
PO:0009025-vascular leaf
PO:0009029-stamen
PO:0009047-stem
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0020031-radicle
PO:0020103-flag leaf
PO:0020104-leaf sheath
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  15 1 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0000001[#] PO:0020031[#] MCP:1000107[#] # # #  
  15 2 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0005052[#] # # #  
  15 3 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0009010[#] PO:0007022[72h] # # #  
  15 4 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0009005[#] PO:0009025[#] PO:0007106[#] # # #  
  15 5 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0009006[#] PO:0007071[#] # # #  
  15 6 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0009005[#] PO:0007071[#] # # #  
  15 7 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0009047[#] PO:0009047[#] MCP:1000136[#] # # #  
  15 8 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0020103[#] PO:0009047[#] MCP:1000136[#] # # #  
  15 9 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0009047[#] PO:0007041[#] # # #  
  15 10 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0009049[#] PO:0007041[#] # # #  
  15 11 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0020103[#] MCP:1000201[#] # # #  
  15 12 LOC_Os12g18360 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  15 13 LOC_Os12g18360 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  15 14 LOC_Os12g18360 # # 39946 CU:086 # WT # MCP:1000250[#] # # #  
  15 15 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0009025[#] MCP:1000194[#] # # #  
  15 16 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0020104[#] MCP:1000194[#] # # #  
  15 17 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0009049[#] MCP:1000194[#] # # #  
  15 18 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0006000[#] MCP:1000110[#] # # #  
  15 19 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0009029[#] MCP:1000110[#] # # #  
  15 20 LOC_Os12g18360 # # 39946 CU:086 # WT # PO:0009051[#] MCP:1000489[#] # # #  
 
LOC_Os12g18360-NB-ARC domain containing protein, expressed
39946-Oryza sativa (indica group)
CU:086-cv. Minghui 63
WT-Wild Type
h-Hours
MCP:1000107-post-germination stage
MCP:1000110-1 day pre-heading stage
MCP:1000136-5 days pre-heading stage
MCP:1000194-inflorescence 4-5cm stage
MCP:1000201-14 days post-heading stage
MCP:1000250-inflorescenece secondary branch primordium differentiation stage
MCP:1000489-3 days post-anthesis stage
PO:0000001-embryo proper
PO:0005052-plant callus
PO:0006000-Poaceae hull
PO:0007022-imbibition
PO:0007041-inflorescence emergence from flag leaf sheath
PO:0007071-2.02 main shoot and axillary shoots visible at two nodes
PO:0007106-LP.03 three leaves visible
PO:0009005-root
PO:0009006-shoot system
PO:0009010-seed
PO:0009025-vascular leaf
PO:0009029-stamen
PO:0009047-stem
PO:0009049-inflorescence
PO:0009051-spikelet
PO:0020031-radicle
PO:0020103-flag leaf
PO:0020104-leaf sheath
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India