Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  21973088 5.C F Gene expression analysis (transcription) : Quantitative RT-PCR  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  1 1 LOC_Os04g57610 # # 39947 CU:021 # WT # PO:0009005[#] # # 1  
  1 2 LOC_Os12g41950 # # 39947 CU:021 # WT # PO:0009005[#] # # 1  
 
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
WT-Wild Type
PO:0009005-root
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  2 1 LOC_Os04g57610 # # 39947 CU:021 # WT # PO:0009005[#] EO:0007070 10µM 3h # 1.07296  
  2 2 LOC_Os12g41950 # # 39947 CU:021 # WT # PO:0009005[#] EO:0007070 10µM 3h # 0.85837  
 
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
WT-Wild Type
µM-micromolar
h-Hours
PO:0009005-root
EO:0007070-indole acetic acid regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  3 1 LOC_Os04g57610 # # 39947 CU:021 # WT # PO:0009005[#] EO:0007204 1µM 3h # 2.18884  
  3 2 LOC_Os12g41950 # # 39947 CU:021 # WT # PO:0009005[#] EO:0007204 1µM 3h # 1.58798  
 
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
WT-Wild Type
µM-micromolar
h-Hours
PO:0009005-root
EO:0007204-1-naphthaleneacetic acid
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  4 1 LOC_Os04g57610 # # 39947 CU:021 # WT # PO:0009005[#] EO:0007180 1µM 3h # 0.98712  
  4 2 LOC_Os12g41950 # # 39947 CU:021 # WT # PO:0009005[#] EO:0007180 1µM 3h # 0.94421  
 
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
WT-Wild Type
µM-micromolar
h-Hours
PO:0009005-root
EO:0007180-2,4-dichlorophenoxyacetic acid
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  5 1 LOC_Os04g57610 # # 39947 CU:021 # WT # PO:0009005[#] MCE:1000239 1µM 3h # 6.0515  
  5 2 LOC_Os12g41950 # # 39947 CU:021 # WT # PO:0009005[#] MCE:1000239 1µM 3h # 1.37339  
 
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
WT-Wild Type
µM-micromolar
h-Hours
PO:0009005-root
MCE:1000239-1-naphthylphthalamic acid (NPA)
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  6 1 LOC_Os04g57610 # # 39947 CU:021 # WT # PO:0009005[#] MCE:1000129 1µM 3h # 3.90558  
  6 2 LOC_Os12g41950 # # 39947 CU:021 # WT # PO:0009005[#] MCE:1000129 1µM 3h # 1.03004  
 
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
WT-Wild Type
µM-micromolar
h-Hours
PO:0009005-root
MCE:1000129-triiodobenzoic acid
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  7 1 LOC_Os04g57610 # # 39947 CU:021 # WT # PO:0009005[#] MCE:1000240 1µM 3h # 0.81545  
  7 2 LOC_Os12g41950 # # 39947 CU:021 # WT # PO:0009005[#] MCE:1000240 1µM 3h # 1.37339  
 
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
WT-Wild Type
µM-micromolar
h-Hours
PO:0009005-root
MCE:1000240-1-naphthoxyacetic acids (1-NOA)
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  8 1 LOC_Os04g57610 # # 39947 CU:021 # WT # PO:0009005[#] MCE:1000023 1µM 3h # 8.58369  
  8 2 LOC_Os12g41950 # # 39947 CU:021 # WT # PO:0009005[#] MCE:1000023 1µM 3h # 1.50215  
 
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
WT-Wild Type
µM-micromolar
h-Hours
PO:0009005-root
MCE:1000023-benzyl aminopurine (BPA)
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  9 1 LOC_Os04g57610 # # 39947 CU:021 # WT # PO:0009005[#] MCE:1000063 10µM 3h # 1.11588  
  9 2 LOC_Os12g41950 # # 39947 CU:021 # WT # PO:0009005[#] MCE:1000063 10µM 3h # 0.81545  
 
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
WT-Wild Type
µM-micromolar
h-Hours
PO:0009005-root
MCE:1000063-epibrassinolide
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  10 1 LOC_Os04g57610 # # 39947 CU:021 # WT # PO:0009005[#] EO:0007105 10µM 3h # 1.07296  
  10 2 LOC_Os12g41950 # # 39947 CU:021 # WT # PO:0009005[#] EO:0007105 10µM 3h # 0.98712  
 
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
WT-Wild Type
µM-micromolar
h-Hours
PO:0009005-root
EO:0007105-abscisic acid regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  11 1 LOC_Os04g57610 # # 39947 CU:021 # WT # PO:0009005[#] MCE:1000056 10µM 3h # 3.13305  
  11 2 LOC_Os12g41950 # # 39947 CU:021 # WT # PO:0009005[#] MCE:1000056 10µM 3h # 1.41631  
 
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
WT-Wild Type
µM-micromolar
h-Hours
PO:0009005-root
MCE:1000056-1-aminocyclopropane-1-carboxylic acid
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  12 1 LOC_Os04g57610 # # 39947 CU:021 # WT # PO:0009005[#] EO:0007080 10µM 3h # 7.72532  
  12 2 LOC_Os12g41950 # # 39947 CU:021 # WT # PO:0009005[#] EO:0007080 10µM 3h # 1.58798  
 
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
WT-Wild Type
µM-micromolar
h-Hours
PO:0009005-root
EO:0007080-jasmonic acid regimen
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. Relative expression  
  13 1 LOC_Os04g57610 # # 39947 CU:021 # WT # PO:0009005[#] EO:0007187 1mM 3h # 0.81545  
  13 2 LOC_Os12g41950 # # 39947 CU:021 # WT # PO:0009005[#] EO:0007187 1mM 3h # 0.55794  
 
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
WT-Wild Type
mM-millimolar
h-Hours
PO:0009005-root
EO:0007187-salicylic acid regimen
 
     

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India