| Regulation details |
|
PubMed Id |
Figure
|
Type |
Experimental method |
Comment |
|
| |
21973088 |
5.C |
F |
Gene expression analysis (transcription) : Quantitative RT-PCR |
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| |
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|
| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
1 |
1 |
LOC_Os04g57610 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
# |
# |
 1 |
|
| |
1 |
2 |
LOC_Os12g41950 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
# |
# |
1 |
|
|
| |
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
|
WT-Wild Type
|
PO:0009005-root
|
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| |
|
|
|
|
| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
2 |
1 |
LOC_Os04g57610 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
EO:0007070 10µM 3h |
# |
1.07296 |
|
| |
2 |
2 |
LOC_Os12g41950 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
EO:0007070 10µM 3h |
# |
0.85837 |
|
|
| |
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
|
WT-Wild Type
µM-micromolar
h-Hours
|
PO:0009005-root
EO:0007070-indole acetic acid regimen
|
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| |
|
|
|
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| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
3 |
1 |
LOC_Os04g57610 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
EO:0007204 1µM 3h |
# |
2.18884 |
|
| |
3 |
2 |
LOC_Os12g41950 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
EO:0007204 1µM 3h |
# |
1.58798 |
|
|
| |
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
|
WT-Wild Type
µM-micromolar
h-Hours
|
PO:0009005-root
EO:0007204-1-naphthaleneacetic acid
|
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| |
|
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Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
4 |
1 |
LOC_Os04g57610 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
EO:0007180 1µM 3h |
# |
0.98712 |
|
| |
4 |
2 |
LOC_Os12g41950 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
EO:0007180 1µM 3h |
# |
0.94421 |
|
|
| |
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
|
WT-Wild Type
µM-micromolar
h-Hours
|
PO:0009005-root
EO:0007180-2,4-dichlorophenoxyacetic acid
|
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| |
|
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| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
5 |
1 |
LOC_Os04g57610 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
MCE:1000239 1µM 3h |
# |
6.0515 |
|
| |
5 |
2 |
LOC_Os12g41950 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
MCE:1000239 1µM 3h |
# |
1.37339 |
|
|
| |
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
|
WT-Wild Type
µM-micromolar
h-Hours
|
PO:0009005-root
MCE:1000239-1-naphthylphthalamic acid (NPA)
|
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| |
|
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| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
6 |
1 |
LOC_Os04g57610 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
MCE:1000129 1µM 3h |
# |
3.90558 |
|
| |
6 |
2 |
LOC_Os12g41950 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
MCE:1000129 1µM 3h |
# |
1.03004 |
|
|
| |
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
|
WT-Wild Type
µM-micromolar
h-Hours
|
PO:0009005-root
MCE:1000129-triiodobenzoic acid
|
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| |
|
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| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
7 |
1 |
LOC_Os04g57610 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
MCE:1000240 1µM 3h |
# |
0.81545 |
|
| |
7 |
2 |
LOC_Os12g41950 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
MCE:1000240 1µM 3h |
# |
1.37339 |
|
|
| |
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
|
WT-Wild Type
µM-micromolar
h-Hours
|
PO:0009005-root
MCE:1000240-1-naphthoxyacetic acids (1-NOA)
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| |
|
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| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
8 |
1 |
LOC_Os04g57610 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
MCE:1000023 1µM 3h |
# |
8.58369 |
|
| |
8 |
2 |
LOC_Os12g41950 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
MCE:1000023 1µM 3h |
# |
1.50215 |
|
|
| |
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
|
WT-Wild Type
µM-micromolar
h-Hours
|
PO:0009005-root
MCE:1000023-benzyl aminopurine (BPA)
|
|
| |
|
|
|
|
| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
9 |
1 |
LOC_Os04g57610 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
MCE:1000063 10µM 3h |
# |
1.11588 |
|
| |
9 |
2 |
LOC_Os12g41950 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
MCE:1000063 10µM 3h |
# |
0.81545 |
|
|
| |
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
|
WT-Wild Type
µM-micromolar
h-Hours
|
PO:0009005-root
MCE:1000063-epibrassinolide
|
|
| |
|
|
|
|
| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
10 |
1 |
LOC_Os04g57610 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
EO:0007105 10µM 3h |
# |
1.07296 |
|
| |
10 |
2 |
LOC_Os12g41950 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
EO:0007105 10µM 3h |
# |
0.98712 |
|
|
| |
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
|
WT-Wild Type
µM-micromolar
h-Hours
|
PO:0009005-root
EO:0007105-abscisic acid regimen
|
|
| |
|
|
|
|
| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
11 |
1 |
LOC_Os04g57610 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
MCE:1000056 10µM 3h |
# |
3.13305 |
|
| |
11 |
2 |
LOC_Os12g41950 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
MCE:1000056 10µM 3h |
# |
1.41631 |
|
|
| |
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
|
WT-Wild Type
µM-micromolar
h-Hours
|
PO:0009005-root
MCE:1000056-1-aminocyclopropane-1-carboxylic acid
|
|
| |
|
|
|
|
| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
12 |
1 |
LOC_Os04g57610 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
EO:0007080 10µM 3h |
# |
7.72532 |
|
| |
12 |
2 |
LOC_Os12g41950 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
EO:0007080 10µM 3h |
# |
1.58798 |
|
|
| |
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
|
WT-Wild Type
µM-micromolar
h-Hours
|
PO:0009005-root
EO:0007080-jasmonic acid regimen
|
|
| |
|
|
|
|
| |
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Relative expression |
|
| |
13 |
1 |
LOC_Os04g57610 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
EO:0007187 1mM 3h |
# |
0.81545 |
|
| |
13 |
2 |
LOC_Os12g41950 |
# |
# |
39947 |
CU:021 |
# |
WT |
# |
PO:0009005[#] |
EO:0007187 1mM 3h |
# |
0.55794 |
|
|
| |
LOC_Os04g57610-auxin response factor, putative, expressed
LOC_Os12g41950-auxin response factor, putative, expressed
39947-Oryza sativa japonica group
CU:021-cv. Dongjin, cv. Dongjinbyeo, cv. Donjin, cv. Donjinbyeo, cv. IR348
|
WT-Wild Type
mM-millimolar
h-Hours
|
PO:0009005-root
EO:0007187-salicylic acid regimen
|
|
| |
|
|
|
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|
