Regulation details |
|
PubMed Id |
Figure
|
Type |
Experimental method |
Comment |
|
|
22551450 |
2.A.ii |
F |
Agronomic trait analysis |
OsNAC9-AK067690-LOC_Os03g60080(given in paper & BLAST with TIGR). NT is taken as wild type. Yield components were evaluated in cultivating season of 2010. Exact values for the different traits analysed have been taken from supplementary information. fig 2.A is divided into 4 parts. |
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|
|
|
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Percent |
|
|
1 |
1 |
LOC_Os03g60080 |
# |
# |
39947 |
CU:100 |
# |
WT |
# |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000576 |
100 grp_1_1_1 |
|
|
1 |
2 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
10 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000576 |
98.21302 |
|
|
1 |
3 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
34 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000576 |
100 |
|
|
1 |
4 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
60 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000576 |
98.76754 |
|
|
|
LOC_Os03g60080-NAC domain-containing protein 67, putative, expressed
PR:26-RCc3 , LOC_Os10g40430
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
|
TOE-Transgenic overexpression
WT-Wild Type
|
PO:0000003-whole plant
PO:0007632-seed maturation stage
TO:0000576-stem length
|
|
|
|
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|
|
|
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Centimeter |
|
|
2 |
1 |
LOC_Os03g60080 |
# |
# |
39947 |
CU:100 |
# |
WT |
# |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000040 |
21.03 grp_2_1_1 |
|
|
2 |
2 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
10 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000040 |
21.87 |
|
|
2 |
3 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
34 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000040 |
22.13 |
|
|
2 |
4 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
60 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000040 |
22.57 |
|
|
|
LOC_Os03g60080-NAC domain-containing protein 67, putative, expressed
PR:26-RCc3 , LOC_Os10g40430
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
|
TOE-Transgenic overexpression
WT-Wild Type
|
PO:0000003-whole plant
PO:0007632-seed maturation stage
TO:0000040-panicle length
|
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|
|
|
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|
|
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
number/hill |
|
|
3 |
1 |
LOC_Os03g60080 |
# |
# |
39947 |
CU:100 |
# |
WT |
# |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000152 |
13.77 grp_3_1_1 |
|
|
3 |
2 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
10 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000152 |
13.8 |
|
|
3 |
3 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
34 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000152 |
14.27 |
|
|
3 |
4 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
60 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000152 |
13.8 |
|
|
|
LOC_Os03g60080-NAC domain-containing protein 67, putative, expressed
PR:26-RCc3 , LOC_Os10g40430
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
|
TOE-Transgenic overexpression
WT-Wild Type
|
PO:0000003-whole plant
PO:0007632-seed maturation stage
TO:0000152-panicle number
|
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|
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Number |
|
|
4 |
1 |
LOC_Os03g60080 |
# |
# |
39947 |
CU:100 |
# |
WT |
# |
PO:0000003[#] PO:0007632[#] |
# |
MCT:1000506 |
107.65 grp_4_1_1 |
|
|
4 |
2 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
10 |
PO:0000003[#] PO:0007632[#] |
# |
MCT:1000506 |
111.45 |
|
|
4 |
3 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
34 |
PO:0000003[#] PO:0007632[#] |
# |
MCT:1000506 |
113.39 |
|
|
4 |
4 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
60 |
PO:0000003[#] PO:0007632[#] |
# |
MCT:1000506 |
130.1 |
|
|
|
LOC_Os03g60080-NAC domain-containing protein 67, putative, expressed
PR:26-RCc3 , LOC_Os10g40430
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
|
TOE-Transgenic overexpression
WT-Wild Type
|
PO:0000003-whole plant
PO:0007632-seed maturation stage
MCT:1000506-spikelet number per panicle
|
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|
|
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
number/hill |
|
|
5 |
1 |
LOC_Os03g60080 |
# |
# |
39947 |
CU:100 |
# |
WT |
# |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000456 |
1468.23 grp_5_1_1 |
|
|
5 |
2 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
10 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000456 |
1545.63 |
|
|
5 |
3 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
34 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000456 |
1604.3 |
|
|
5 |
4 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
60 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000456 |
1771.87 |
|
|
|
LOC_Os03g60080-NAC domain-containing protein 67, putative, expressed
PR:26-RCc3 , LOC_Os10g40430
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
|
TOE-Transgenic overexpression
WT-Wild Type
|
PO:0000003-whole plant
PO:0007632-seed maturation stage
TO:0000456-spikelet number
|
|
|
|
|
|
|
|
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Percent |
|
|
6 |
1 |
LOC_Os03g60080 |
# |
# |
39947 |
CU:100 |
# |
WT |
# |
PO:0000003[#] PO:0007632[#] |
# |
MCT:1000228 |
82.74 grp_6_1_1 |
|
|
6 |
2 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
10 |
PO:0000003[#] PO:0007632[#] |
# |
MCT:1000228 |
85.41 |
|
|
6 |
3 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
34 |
PO:0000003[#] PO:0007632[#] |
# |
MCT:1000228 |
85.87 |
|
|
6 |
4 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
60 |
PO:0000003[#] PO:0007632[#] |
# |
MCT:1000228 |
82.15 |
|
|
|
LOC_Os03g60080-NAC domain-containing protein 67, putative, expressed
PR:26-RCc3 , LOC_Os10g40430
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
|
TOE-Transgenic overexpression
WT-Wild Type
|
PO:0000003-whole plant
PO:0007632-seed maturation stage
MCT:1000228-grain filling rate
|
|
|
|
|
|
|
|
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
number/hill |
|
|
7 |
1 |
LOC_Os03g60080 |
# |
# |
39947 |
CU:100 |
# |
WT |
# |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000447 |
1215.23 grp_7_1_1 |
|
|
7 |
2 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
10 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000447 |
1318 |
|
|
7 |
3 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
34 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000447 |
1372.4 |
|
|
7 |
4 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
60 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000447 |
1458.5 |
|
|
|
LOC_Os03g60080-NAC domain-containing protein 67, putative, expressed
PR:26-RCc3 , LOC_Os10g40430
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
|
TOE-Transgenic overexpression
WT-Wild Type
|
PO:0000003-whole plant
PO:0007632-seed maturation stage
TO:0000447-filled grain number
|
|
|
|
|
|
|
|
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Gram |
|
|
8 |
1 |
LOC_Os03g60080 |
# |
# |
39947 |
CU:100 |
# |
WT |
# |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000590 |
27.82 grp_8_1_1 |
|
|
8 |
2 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
10 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000590 |
31.64 |
|
|
8 |
3 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
34 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000590 |
32.36 |
|
|
8 |
4 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
60 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000590 |
31.88 |
|
|
|
LOC_Os03g60080-NAC domain-containing protein 67, putative, expressed
PR:26-RCc3 , LOC_Os10g40430
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
|
TOE-Transgenic overexpression
WT-Wild Type
|
PO:0000003-whole plant
PO:0007632-seed maturation stage
TO:0000590-grain weight
|
|
|
|
|
|
|
|
Row |
Col. |
Gene analysed |
Transgene |
Prom. Id |
Taxon Id |
Culti. Id /
Ecotype |
Mutant Id |
Plant type |
Trans. Id |
Plant Ont. |
Env. Ont. |
Trait Ont. |
Grams |
|
|
9 |
1 |
LOC_Os03g60080 |
# |
# |
39947 |
CU:100 |
# |
WT |
# |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000592 |
22.92 grp_9_1_1 |
|
|
9 |
2 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
10 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000592 |
24.09 |
|
|
9 |
3 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
34 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000592 |
23.92 |
|
|
9 |
4 |
LOC_Os03g60080 |
LOC_Os03g60080 |
PR:26 |
39947 |
CU:100 |
# |
TOE |
60 |
PO:0000003[#] PO:0007632[#] |
# |
TO:0000592 |
21.87 |
|
|
|
LOC_Os03g60080-NAC domain-containing protein 67, putative, expressed
PR:26-RCc3 , LOC_Os10g40430
39947-Oryza sativa japonica group
CU:100-cv. Nipponbare, cv. GA3, cv. Nipponbare / Japonica
|
TOE-Transgenic overexpression
WT-Wild Type
|
PO:0000003-whole plant
PO:0007632-seed maturation stage
TO:0000592-1000-dehulled grain weight
|
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|
|
|
|
|
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|