Figure Details Page
Regulation details
PubMed Id Figure
Type Experimental method Comment  
  23548780 1.i T Chlorophyll content measurement Table 1 is divided into 5 parts.OsCga1-LOC_Os02g12790.Statistically significant difference was calculated at P<0.01. Cga1 transgenics were compared with the wildtype control (Wt-Kay) under three different N regimes: FN, SN, and LN (n < 40).1 g of slow-release fertilizer per plant along with four monthly applications of a nutrient solution containing N at 200 ml/L (NH4NO3) for full nitrogen treatment, 2 L weekly with 10 mM NO3 as SN, whereas 3 mM NO3 was used as LN.  
             
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. SPAD value  
  1 1 LOC_Os02g12790 LOC_Os02g12790 PR:007 39947 CU:176 # TRI # PO:0025034[#] EO:0007090 200Ál TO:0000495 42.4  
  1 2 LOC_Os02g12790 LOC_Os02g12790 PR:007 39947 CU:176 # TRI # PO:0025034[#] EO:0007406 10mM TO:0000495 37.4  
  1 3 LOC_Os02g12790 LOC_Os02g12790 PR:007 39947 CU:176 # TRI # PO:0025034[#] EO:0007406 3mM TO:0000495 30.1  
 
LOC_Os02g12790-GATA zinc finger domain containing protein, expressed
PR:007-ubiquitin
39947-Oryza sativa japonica group
CU:176-Kaybonnet
TRI-Transgenic RNAi
mM-millimolar
Ál-
PO:0025034-leaf
EO:0007090-ammonium nitrate regimen
EO:0007406-nitrate regimen
TO:0000495-chlorophyll content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. SPAD value  
  2 1 LOC_Os02g12790 # # 39947 CU:176 # WT # PO:0025034[#] EO:0007090 200Ál TO:0000495 49.2
grp_2_1_1
 
  2 2 LOC_Os02g12790 # # 39947 CU:176 # WT # PO:0025034[#] EO:0007406 10mM TO:0000495 42.1
grp_2_2_1
 
  2 3 LOC_Os02g12790 # # 39947 CU:176 # WT # PO:0025034[#] EO:0007406 3mM TO:0000495 38.1
grp_2_3_1
 
 
LOC_Os02g12790-GATA zinc finger domain containing protein, expressed
39947-Oryza sativa japonica group
CU:176-Kaybonnet
WT-Wild Type
mM-millimolar
Ál-
PO:0025034-leaf
EO:0007090-ammonium nitrate regimen
EO:0007406-nitrate regimen
TO:0000495-chlorophyll content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. SPAD value  
  3 1 LOC_Os02g12790 LOC_Os02g12790 PR:007 39947 CU:176 # TOE 1 PO:0025034[#] EO:0007090 200Ál TO:0000495 51.9  
  3 2 LOC_Os02g12790 LOC_Os02g12790 PR:007 39947 CU:176 # TOE 1 PO:0025034[#] EO:0007406 10mM TO:0000495 46.8  
  3 3 LOC_Os02g12790 LOC_Os02g12790 PR:007 39947 CU:176 # TOE 1 PO:0025034[#] EO:0007406 3mM TO:0000495 43.3  
 
LOC_Os02g12790-GATA zinc finger domain containing protein, expressed
PR:007-ubiquitin
39947-Oryza sativa japonica group
CU:176-Kaybonnet
TOE-Transgenic overexpression
mM-millimolar
Ál-
PO:0025034-leaf
EO:0007090-ammonium nitrate regimen
EO:0007406-nitrate regimen
TO:0000495-chlorophyll content
 
     
  Row Col. Gene analysed Transgene Prom. Id Taxon Id Culti. Id /
Ecotype
Mutant Id Plant type Trans. Id Plant Ont. Env. Ont. Trait Ont. SPAD value  
  4 1 LOC_Os02g12790 LOC_Os02g12790 PR:007 39947 CU:176 # TOE 2 PO:0025034[#] EO:0007090 200Ál TO:0000495 60.2  
  4 2 LOC_Os02g12790 LOC_Os02g12790 PR:007 39947 CU:176 # TOE 2 PO:0025034[#] EO:0007406 10mM TO:0000495 58.8  
  4 3 LOC_Os02g12790 LOC_Os02g12790 PR:007 39947 CU:176 # TOE 2 PO:0025034[#] EO:0007406 3mM TO:0000495 56.2  
 
LOC_Os02g12790-GATA zinc finger domain containing protein, expressed
PR:007-ubiquitin
39947-Oryza sativa japonica group
CU:176-Kaybonnet
TOE-Transgenic overexpression
mM-millimolar
Ál-
PO:0025034-leaf
EO:0007090-ammonium nitrate regimen
EO:0007406-nitrate regimen
TO:0000495-chlorophyll content
 
     
Functional details
PubMed Id Figure
Type Experimental Method Comment  
  23548780 1.i T Chlorophyll content measurement OsCga1-LOC_Os02g12790.  
  S. No. Locus Id 1 GO Id Dep. loc Dep. type From To Motif    
  1 LOC_Os02g12790 GO:0010167 # # # # #            
 
LOC_Os02g12790-GATA zinc finger domain containing protein, expressed
GO:0010167-response to nitrate
 

Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India