Rice gene details
Searching for AAB30197 [ beta-glucuronidase ]

Functional details
Molecular Function
Not found
Biological process
Not found
Cellular component
Not found

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007024 aerobic environment (+)
2 EO:0007048 sodium chloride regimen (+)
3 EO:0007068 ethylene regimen (+)
4 EO:0007105 abscisic acid regimen (+)
5 EO:0007162 continuous light regimen (+)
6 EO:0007173 warm/hot temperature regimen (+)
7 EO:0007180 2,4-dichlorophenoxyacetic acid (+)
8 EO:0007185 salt regimen (+)
9 EO:0007187 salicylic acid regimen (+)
10 EO:0007198 water environment (-)
11 EO:0007204 1-naphthaleneacetic acid (+)
12 EO:0007223 cadmium chloride (+)
13 EO:0007242 iron nutrient regimen (+)
14 EO:0007270 continuous dark (no light) regimen (+)
15 EO:0007319 warm/hot air temperature regimen (+)
16 EO:0007332 cold air temperature regimen (+)
17 EO:0007368 warm/hot water temperature regimen (+)
18 EO:0007373 mechanical damage (+)
19 EO:0007383 watering regimen (-)
20 EO:0007404 drought environment (+)
21 EO:0007407 methyl jasmonate (+)
22 EO:0007412 zinc sulphate regimen (-)
23 EO:0007415 hydrogen peroxide (+)
24 EO:0007527 cupric sulfate (+)
25 EO:0007540 boric acid (+)
26 MCE:1000016 polyethylene glycol (PEG) treatment (+)
27 MCE:1000023 benzyl aminopurine (BPA) (+)
28 MCE:1000037 sucrose (+)
29 MCE:1000044 mannitol (+)
30 MCE:1000053 zeatin (+)
31 MCE:1000056 1-aminocyclopropane-1-carboxylic acid (+)
32 MCE:1000069 dessication/dehydration stress (+)
33 MCE:1000075 recovery treatment (+)
34 MCE:1000077 methylglyoxal (+)
35 MCE:1000078 potassium chloride regimen (KCl) (+)
36 MCE:1000091 methyl viologen/paraquat (+)
37 MCE:1000105 fructose (-)
38 MCE:1000114 arsenite (+)
39 MCE:1000119 calcium chloride regimen (CaCl2) (+)
40 MCE:1000140 maltose (-)
41 MCE:1000143 iron deficiency treatment (+)
42 MCE:1000166 inorganic phosphate (+)
43 MCE:1000167 inorganic phosphate deficiency treatment (+)
44 MCE:1000173 cadmium nutrient regimen (+)
45 MCE:1000177 cobalt chloride regimen (CoCl2) (+)
46 MCE:1000189 azetidine-2-carboxylic acid (+)
47 MCE:1000241 D-glucose (-)
48 MCE:1000245 2′-amino-3′-methoxyflavone (PD98059) (+)
49 MCE:1000250 Magnaporthe oryzae pv. oryzae, Kyu89-246 (MAFF 101506; race 003.0) (+)
50 MCE:1000251 Magnaporthe oryzae pv. oryzae strain Kyu77-07A (avrPish; race 102.0) (+)
51 MCE:1000262 Magnaporthe oryzae strain guy11 (+)
52 MCE:1000271 Magnaporthe grisea Kyu89-246 (MAFF number 101506) (+)
53 MCE:1000288 GA3 gibberellin (+)
54 MCE:1000300 boron deficiency treatment (+)
55 MCE:1000331 deoxygenated 0.1% (w/v) agar nutrient solution (+)

Metabolic Pathway details
Not found

QTL details
Not found

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000107 post-germination stage (+)
2 MCP:1000204 5 days post-anthesis stage (+)
3 MCP:1000214 7-8 days post-anthesis stage (+)
4 MCP:1000228 12-15 days post-fertilization stage (+)
5 MCP:1000231 pollen mother cell formation stage (+)
6 MCP:1000288 7 days post-anthesis stage (+)
7 MCP:1000330 pre-anthesis stage (+)
8 MCP:1000335 3 days post-fertilization stage (+)
9 MCP:1000336 5 days post-fertilization stage (+)
10 MCP:1000337 10 days post-fertilization stage (+)
11 MCP:1000338 15 days post-fertilization stage (+)
12 MCP:1000339 30 days post-fertilization stage (+)
13 MCP:1000347 1 day after sowing (+)
14 MCP:1000348 2 days after sowing (+)
15 MCP:1000349 3 days after sowing (+)
16 MCP:1000408 8 days post-fertilization stage (+)
17 MCP:1000450 post-fertilization stage (+)
18 MCP:1000460 12 days post-anthesis stage (+)
19 MCP:1000469 20 days post-fertilization stage (+)
20 MCP:1000471 after sowing (+)
21 MCP:1000473 20 days post-anthesis stage (+)
22 MCP:1000478 17 days post-anthesis stage (+)
23 MCP:1000518 seedling development stage (+)
24 MCP:1000519 mature inflorescence stage (+)
25 MCP:1000520 young inflorescence stage (+)
26 MCP:1000521 mature plant stage (+)
27 MCP:1000532 25 days post-heading stage (+)
28 MCP:1000587 pistil and stamen formation stage (+)
29 PO:0001009 D pollen mother cell meiosis stage (+)
30 PO:0001017 M germinated pollen stage (+)
31 PO:0001040 dry seed stage (+)
32 PO:0001053 3 leaf fully expanded (+)
33 PO:0001054 4 leaf senescence stage (+)
34 PO:0001096 primary endosperm cell stage (+)
35 PO:0001170 seed development stages (+)
36 PO:0004506 developing seed stage (+)
37 PO:0007013 BO.03 late boot stage (+)
38 PO:0007014 booting (+)
39 PO:0007016 4 flowering (+)
40 PO:0007022 imbibition (+)
41 PO:0007041 inflorescence emergence from flag leaf sheath (+)
42 PO:0007042 5 fruit formation (+)
43 PO:0007050 FR.03 late stage of fruit ripening (+)
44 PO:0007057 0 germination (+)
45 PO:0007063 LP.07 seven leaves visible (+)
46 PO:0007065 LP.05 five leaves visible (+)
47 PO:0007073 2 formation of axillary shoot (+)
48 PO:0007079 SE.00 stem elongation begins (+)
49 PO:0007106 LP.03 three leaves visible (+)
50 PO:0007130 B reproductive growth (+)
51 PO:0007510 root emergence (+)
52 PO:0007517 lateral root emergence (+)
53 PO:0007613 stamen primordium visible (+)
54 PO:0007616 4 anthesis (+)
55 PO:0007617 5 post anthesis (+)
56 PO:0007618 carpel primordium visible (+)
57 PO:0007620 ovule primordium visible (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000005 large vascular bundle (+)
2 MCP:1000040 lamina joint (+)
3 MCP:1000058 etiolated seedling (+)
4 MCP:1000060 root/shoot junction (+)
5 MCP:1000084 upper shoot (+)
6 MCP:1000085 lower shoot (+)
7 MCP:1000152 glumous flower (+)
8 MCP:1000153 vein of palea (+)
9 MCP:1000155 vein of lemma (+)
10 MCP:1000159 root base (+)
11 MCP:1000219 vascular parenchyma (+)
12 MCP:1000220 bundle sheath cell (+)
13 MCP:1000221 vein of spikelet (+)
14 MCP:1000223 main vascular cells of dorsal side of seed (+)
15 MCP:1000224 cross cells layer of maternal projection of seed (+)
16 MCP:1000225 tube cells layer of maternal projection of seed (+)
17 MCP:1000226 subaleuron cells of filial part of seed (-)
18 MCP:1000230 third leaf from top (+)
19 MCP:1000309 small vascular bundle (+)
20 MCP:1000314 first leaf from base (+)
21 MCP:1000315 second leaf from base (+)
22 MCP:1000316 third leaf from base (+)
23 MCP:1000342 small vascular cells of inner leaf layer (+)
24 MCP:1000343 small vascular cells of outer leaf layer (+)
25 MCP:1000344 dorsal vascular bundles (+)
26 MCP:1000345 ventral vascular bundles (+)
27 MCP:1000362 fourth leaf from base (+)
28 MCP:1000363 fifth leaf from base (+)
29 MCP:1000385 middle portion of spikelet (+)
30 MCP:1000386 basal part of inflorescence axis (+)
31 MCP:1000389 interior of ovary (-)
32 MCP:1000390 intercalary meristem between stems and spikelets (+)
33 MCP:1000391 intercalary meristem between stems and roots (+)
34 MCP:1000392 long crown root (-)
35 MCP:1000393 short crown root (+)
36 MCP:1000398 sixth leaf from base (+)
37 MCP:1000399 seventh leaf from base (+)
38 MCP:1000406 second leaf from top (+)
39 MCP:1000412 first leaf from top (-)
40 MCP:1000422 cortical parenchyma cell (+)
41 MCP:1000426 crown root primordium (+)
42 MCP:1000443 eighth leaf from base (+)
43 MCP:1000468 embryonic disc (+)
44 MCP:1000470 seed ventral scale (+)
45 MCP:1000476 nodal septum (+)
46 MCP:1000527 etiolated shoot (+)
47 MCP:1000531 root segment, 2cm from root tip (+)
48 MCP:1000535 root hair (-)
49 MCP:1000536 young leaf sheath (+)
50 MCP:1000537 old leaf sheath (+)
51 MCP:1000575 root segment, 15-25mm from root tip (+)
52 MCP:1000580 base of axillary bud (+)
53 MCP:1000581 young flower (+)
54 MCP:1000585 upper part of ovary (+)
55 MCP:1000586 basal part of ovary (+)
56 MCP:1000591 new lateral root (+)
57 MCP:1000592 mature lateral root (+)
58 PO:0000001 embryo proper (+)
59 PO:0000002 anther wall (+)
60 PO:0000003 whole plant (+)
61 PO:0000005 cultured plant cell (+)
62 PO:0000006 plant protoplast (+)
63 PO:0000016 lateral root primordium (+)
64 PO:0000017 leaf primordium (+)
65 PO:0000025 root tip (+)
66 PO:0000026 primary root tip (+)
67 PO:0000027 lateral root tip (+)
68 PO:0000034 vascular system (+)
69 PO:0000035 cotyledon vascular system (+)
70 PO:0000036 leaf vascular system (+)
71 PO:0000037 shoot apex (+)
72 PO:0000042 shoot-borne root (+)
73 PO:0000043 crown root (+)
74 PO:0000046 seminal root (+)
75 PO:0000048 leaf lamina vascular system (+)
76 PO:0000055 bud (+)
77 PO:0000071 companion cell (+)
78 PO:0000074 parenchyma cell (+)
79 PO:0000077 sclerenchyma cell (+)
80 PO:0000226 rib zone (+)
81 PO:0000258 root cortex (+)
82 PO:0000273 xylem element (+)
83 PO:0000282 trichome (+)
84 PO:0000284 subsidiary cell (+)
85 PO:0000289 sieve tube member (+)
86 PO:0000293 guard cell (+)
87 PO:0000372 metaxylem (+)
88 PO:0003011 root vascular system (+)
89 PO:0003015 primary root differentiation zone (+)
90 PO:0003016 lateral root differentiation zone (+)
91 PO:0004004 epithelium cell (+)
92 PO:0004006 mesophyll cell (+)
93 PO:0004013 epidermal cell (+)
94 PO:0004705 stamen primordium (-)
95 PO:0004709 axillary bud (+)
96 PO:0004724 hypocotyl-root junction (+)
97 PO:0004725 abaxial side of leaf primordium (+)
98 PO:0004726 adaxial side of leaf primordium (+)
99 PO:0005004 shoot node (+)
100 PO:0005005 shoot internode (+)
101 PO:0005019 carpel vascular system (+)
102 PO:0005020 vascular bundle (+)
103 PO:0005040 root pith (+)
104 PO:0005051 hypodermis (+)
105 PO:0005052 plant callus (+)
106 PO:0005059 root endodermis (+)
107 PO:0005352 xylem (+)
108 PO:0005360 aleurone layer (+)
109 PO:0005417 phloem (+)
110 PO:0005421 parenchyma (+)
111 PO:0005645 leaf mesophyll (+)
112 PO:0005679 epidermis (+)
113 PO:0005708 cortex (+)
114 PO:0005772 exodermis (+)
115 PO:0006000 Poaceae hull (+)
116 PO:0006016 leaf epidermis (-)
117 PO:0006020 lateral root apical meristem (+)
118 PO:0006021 adventitious root apical meristem (+)
119 PO:0006036 root epidermis (+)
120 PO:0006070 mesophyll (+)
121 PO:0006073 intercalary meristem (+)
122 PO:0006075 primary phloem (+)
123 PO:0006085 root meristem (+)
124 PO:0006203 pericycle (+)
125 PO:0006319 spikelet pedicel (+)
126 PO:0006321 second order inflorescence axis (+)
127 PO:0006337 inflorescence bract of ear (+)
128 PO:0006339 juvenile leaf (+)
129 PO:0006340 adult leaf (+)
130 PO:0006345 pollen tube (+)
131 PO:0006346 leaf intercalary meristem (+)
132 PO:0006347 stem intercalary meristem (+)
133 PO:0006452 Poaceae microspore (-)
134 PO:0006504 leaf trichome (+)
135 PO:0008007 nucellar projection (+)
136 PO:0008037 seedling (+)
137 PO:0008039 stem base (+)
138 PO:0008047 scutellar vascular system (+)
139 PO:0008048 scutellar epithelium (+)
140 PO:0009000 pulvinus (+)
141 PO:0009001 fruit (+)
142 PO:0009005 root (+)
143 PO:0009006 shoot system (+)
144 PO:0009009 plant embryo (+)
145 PO:0009010 seed (+)
146 PO:0009025 vascular leaf (+)
147 PO:0009029 stamen (+)
148 PO:0009030 carpel (+)
149 PO:0009031 sepal (+)
150 PO:0009036 lodicule (+)
151 PO:0009037 lemma (+)
152 PO:0009038 palea (+)
153 PO:0009039 glume (+)
154 PO:0009040 sterile lemma (-)
155 PO:0009046 flower (+)
156 PO:0009047 stem (+)
157 PO:0009049 inflorescence (+)
158 PO:0009051 spikelet (+)
159 PO:0009052 pedicel (+)
160 PO:0009054 inflorescence bract (+)
161 PO:0009062 gynoecium (+)
162 PO:0009066 anther (+)
163 PO:0009067 filament (+)
164 PO:0009068 connective (+)
165 PO:0009072 ovary (+)
166 PO:0009073 stigma (+)
167 PO:0009074 style (+)
168 PO:0009080 spikelet rachilla (+)
169 PO:0009082 floret (+)
170 PO:0009088 seed coat (+)
171 PO:0009089 endosperm (+)
172 PO:0020003 ovule (+)
173 PO:0020031 radicle (+)
174 PO:0020032 plumule (+)
175 PO:0020033 coleoptile (+)
176 PO:0020034 coleorhiza (+)
177 PO:0020039 leaf lamina (+)
178 PO:0020040 leaf base (+)
179 PO:0020054 bud scale leaf (+)
180 PO:0020091 microgametophyte (+)
181 PO:0020103 flag leaf (+)
182 PO:0020104 leaf sheath (+)
183 PO:0020105 ligule (+)
184 PO:0020110 scutellum (+)
185 PO:0020121 lateral root (+)
186 PO:0020122 inflorescence axis (+)
187 PO:0020123 root cap (+)
188 PO:0020124 root stele (+)
189 PO:0020125 elongation zone (+)
190 PO:0020127 primary root (+)
191 PO:0020135 root differentiation zone (+)
192 PO:0020138 leaf vein (+)
193 PO:0020139 midvein (+)
194 PO:0020141 stem node (+)
195 PO:0020142 stem internode (+)
196 PO:0020144 apical meristem (+)
197 PO:0020147 root apical meristem (+)
198 PO:0020148 shoot apical meristem (+)
199 PO:0020149 quiescent center (+)
200 PO:0025002 basal root (+)
201 PO:0025009 leaf lamina margin (+)
202 PO:0025024 branch node (+)
203 PO:0025034 leaf (+)
204 PO:0025066 stalk (+)
205 PO:0025176 stem trichome (+)
206 PO:0025181 root elongation zone (+)
207 PO:0025185 leaf lamina stomatal complex (+)
208 PO:0025197 stele (+)
209 PO:0025237 leaf guard cell (+)
210 PO:0025281 pollen (+)
211 PO:0025322 hydathode pore (+)
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
S. No. TO Id TO Description Presence(+) or absence(-) of gene expression /activity
1 MCT:1000131 survival of green parts (+)
2 TO:0000136 relative water content (+)
3 TO:0000207 plant height (+)

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

Hanaoka Hideki; Uraguchi Shimpei; Takano Junpei; Tanaka Mayuki; Fujiwara Toru; OsNIP3;1, a rice boric acid channel, regulates boron distribution and is essential for growth under boron-deficient conditions. The Plant journal : for cell and molecular biology 2014:
PMID [24654769]

Kaur Charanpreet; Mustafiz Ananda; Sarkar Ananda K; Ariyadasa Thilini U; Singla-Pareek Sneh L; Sopory Sudhir K; Expression of abiotic stress inducible ETHE1-like protein from rice is higher in roots and is regulated by calcium. Physiologia plantarum 2014:
PMID [24410953]

Kim Hyunmi; Lee Kyeyoon; Hwang Hyunsik; Bhatnagar Nikita; Kim Dool-Yi; Yoon In Sun; Byun Myung-Ok; Kim Sun Tae; Jung Ki-Hong; Kim Beom-Gi; Overexpression of PYL5 in rice enhances drought tolerance, inhibits growth, and modulates gene expression. Journal of experimental botany 2014:65
PMID [24474809]

Li L; Li N; Song S F; Li Y X; Xia X J; Fu X Q; Chen G H; Deng H F; Cloning and characterization of the drought-resistance OsRCI2-5 gene in rice (Oryza sativa L.). Genetics and molecular research : GMR 2014:13
PMID [24938613]

Liang Chengzhen; Wang Yiqin; Zhu Yana; Tang Jiuyou; Hu Bin; Liu Linchuan; Ou Shujun; Wu Hongkai; Sun Xiaohong; Chu Jinfang; Chu Chengcai; OsNAP connects abscisic acid and leaf senescence by fine-tuning abscisic acid biosynthesis and directly targeting senescence-associated genes in rice. Proceedings of the National Academy of Sciences of the United States of America 2014:111
PMID [24951508]

Luo Chengke; Guo Chiming; Wang Wujing; Wang Liangjiang; Chen Liang; Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice. Plant cell reports 2014:33
PMID [24247850]

Ma Biao; Yin Cui-Cui; He Si-Jie; Lu Xiang; Zhang Wan-Ke; Lu Tie-Gang; Chen Shou-Yi; Zhang Jin-Song; Ethylene-induced inhibition of root growth requires abscisic acid function in rice (Oryza sativa L.) seedlings. PLoS genetics 2014:10
PMID [25330236]

Nakashima Kazuo; Jan Asad; Todaka Daisuke; Maruyama Kyonoshin; Goto Shingo; Shinozaki Kazuo; Yamaguchi-Shinozaki Kazuko; Comparative functional analysis of six drought-responsive promoters in transgenic rice. Planta 2014:239
PMID [24062085]

Shan Chi; Mei Zhiling; Duan Jianli; Chen Haiying; Feng Huafeng; Cai Weiming; OsGA2ox5, a Gibberellin Metabolism Enzyme, Is Involved in Plant Growth, the Root Gravity Response and Salt Stress. PloS one 2014:9
PMID [24475234]

10  Shiono Katsuhiro; Ando Miho; Nishiuchi Shunsaku; Takahashi Hirokazu; Watanabe Kohtaro; Nakamura Motoaki; Matsuo Yuichi; Yasuno Naoko; Yamanouchi Utako; Fujimoto Masaru; Takanashi Hideki; Ranathunge Kosala; Franke Rochus B; Shitan Nobukazu; Nishizawa Naoko K; Takamure Itsuro; Yano Masahiro; Tsutsumi Nobuhiro; Schreiber Lukas; Yazaki Kazufumi; Nakazono Mikio; Kato Kiyoaki; RCN1/OsABCG5, an ATP-binding cassette (ABC) transporter, is required for hypodermal suberization of roots in rice (Oryza sativa). The Plant journal : for cell and molecular biology 2014:80
PMID [25041515]

11  Song Jian; Wei Xiangjin; Shao Gaoneng; Sheng Zhonghua; Chen Daibo; Liu Congli; Jiao Guiai; Xie Lihong; Tang Shaoqing; Hu Peisong; The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditions. Plant molecular biology 2014:84
PMID [24132771]

12  Wang Chuang; Li Shuai; Ng Sophia; Zhang Baocai; Zhou Yihua; Whelan James; Wu Ping; Shou Huixia; Mutation in xyloglucan 6-xylosytransferase results in abnormal root hair development in Oryza sativa. Journal of experimental botany 2014:65
PMID [24834920]

13  Wu Chung-Shen; Chen Dai-Yin; Chang Chung-Fu; Li Min-Jeng; Hung Kuei-Yu; Chen Liang-Jwu; Chen Peng-Wen; The promoter and the 5'-untranslated region of rice metallothionein OsMT2b gene are capable of directing high-level gene expression in germinated rice embryos. Plant cell reports 2014:
PMID [24381099]

14  Xu Yanxia; Zhang Saina; Guo Haipeng; Wang Suikang; Xu Ligen; Li Chuanyou; Qian Qian; Chen Fan; Geisler Markus; Qi Yanhua; Jiang De An; OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant journal : for cell and molecular biology 2014:79
PMID [24798203]

15  Yang Chunhua; Li Dayong; Liu Xue; Ji Chengjun; Hao Lili; Zhao Xianfeng; Li Xiaobing; Chen Caiyan; Cheng Zhukuan; Zhu Lihuang; OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.). BMC plant biology 2014:14
PMID [24906444]

16  Zhang Jie; Liu Xiaoqiang; Li Shuyu; Cheng Zhukuan; Li Chuanyou; The Rice Semi-Dwarf Mutant sd37, Caused by a Mutation in CYP96B4, Plays an Important Role in the Fine-Tuning of Plant Growth. PloS one 2014:9
PMID [24498428]

17  Zhao Heming; Ma Tengfei; Wang Xin; Deng Yingtian; Ma Haoli; Zhang Rongsheng; Zhao Jie; OsAUX1 controls lateral root initiation in rice (Oryza sativa L.). Plant, cell & environment 2014:
PMID [25311360]

18  Kang Bo; Zhang Zhongchen; Wang Lingling; Zheng Libin; Mao Weihua; Li Meifei; Wu Yunrong; Wu Ping; Mo Xiaorong; OsCYP2, a chaperone involved in AUX/IAA degradation, plays crucial roles in rice lateral root initiation. The Plant journal 2013:
PMID [23289750]

19  Kim Sung-Ryul; An Gynheung; Rice chloroplast-localized heat shock protein 70, OsHsp70CP1, is essential for chloroplast development under high-temperature conditions. Journal of plant physiology 2013:
PMID [23394789]

20  Mou Shaoliang; Liu Zhiqin; Guan Deyi; Qiu Ailian; Lai Yan; He Shuilin; Functional Analysis and Expressional Characterization of Rice Ankyrin Repeat-Containing Protein, OsPIANK1, in Basal Defense against Magnaporthe oryzae Attack. Plos One 2013:8
PMID [23555750]

21  Zhang Haiwen; Zhang Jianfei; Quan Ruidang; Pan Xiaowu; Wan Liyun; Huang Rongfeng; EAR motif mutation of rice OsERF3 alters the regulation of ethylene biosynthesis and drought tolerance. Planta 2013:
PMID [23420309]

22  Zhang Zhiguo; Zhang Quian; Wu Jinxia; Zheng Xia; Zheng Sheng; Sun Xuehui; Qiu Quansheng; Lu Tiegang; Gene Knockout Study Reveals That Cytosolic Ascorbate Peroxidase 2(OsAPX2) Plays a Critical Role in Growth and Reproduction in Rice under Drought, Salt and Cold Stresses. Plos One 2013:8
PMID [23468992]

23  Zhao Feng Yun; Hu Fan; Zhang Shi Yong; Wang Kai; Zhang Cheng Ren; Liu Tao; MAPKs regulate root growth by influencing auxin signaling and cell cycle-related gene expression in cadmium-stressed rice. Environmental Science and Pollution Research International 2013:
PMID [23430734]

24  Rerksiri Wirat; Zhang Xianwen; Xiong Hairong; Chen Xinbo; Expression and promoter analysis of six heat stress-inducible genes in rice. The Scientific World Journal 2013:2013
PMID [24459431]

25  Yang Meng; Zhang Wan; Dong Huaxia; Zhang Yuanyuan; Lv Kai; Wang Dujun; Lian Xingming; OsNRAMP3 Is a Vascular Bundles-Specific Manganese Transporter That Is Responsible for Manganese Distribution in Rice. PloS one 2013:8
PMID [24391861]

26  Chinpongpanich Aumnart; Limruengroj Kampon; Phean-O-Pas Srivilai; Limpaseni Tipaporn; Buaboocha Teerapong; Expression analysis of calmodulin and calmodulin-like genes from rice, oryza sativa L. BMC Research Notes 2012:5
PMID [23134977]

27  Du Hao; Wu Nai; Fu Jing; Wang Shiping; Li Xianghua; Xiao Jinghua; Xiong Lizhong; A GH3 family member, OsGH3-2, modulates auxin and abscisic acid levels and differentially affects drought and cold tolerance in rice. Journal of Experimental Botany 2012:
PMID [23112280]

28  Duan Junzhi; Zhang Minghui; Zhang Hongliang; Xiong Haiyan; Liu Pengli; Ali Jauhar; Li Jinjie; Li Zichao; OsMIOX, a myo-inositol oxygenase gene, improves drought tolerance through scavenging of reactive oxygen species in rice (Oryza sativa L.). Plant Science 2012:196
PMID [23017909]

29  El-Kereamy Ashraf; Bi Yong-Mei; Ranathunge Kosala; Beatty Perrin H; Good Allen G; Rothstein Steven J; The Rice R2R3-MYB Transcription Factor OsMYB55 Is Involved in the Tolerance to High Temperature and Modulates Amino Acid Metabolism. PloS one 2012:7
PMID [23251677]

30  Gao Qingsong; Yang Zefeng; Zhou Yong; Yin Zhitong; Qiu Jie; Liang Guohua; Xu Chenwu; Characterization of an Abc1 kinase family gene OsABC1-2 conferring enhanced tolerance to dark-induced stress in rice. Gene 2012:498
PMID [22548231]

31  Hong Lilan; Qian Qian; Tang Ding; Wang Kejian; Li Ming; Cheng Zhukuan; A mutation in the rice chalcone isomerase gene causes the golden hull and internode 1 phenotype. Planta 2012:
PMID [22286805]

32  Singh Amanjot; Mittal Dheeraj; Lavania Dhruv; Agarwal Manu; Mishra Ratnesh Chandra; Grover Anil; OsHsfA2c and OsHsfB4b are involved in the transcriptional regulation of cytoplasmic OsClpB (Hsp100) gene in rice (Oryza sativa L.). Cell Stress & Chaperones 2012:17
PMID [22147560]

33  Todaka Daisuke; Nakashima Kazuo; Maruyama Kyonoshin; Kidokoro Satoshi; Osakabe Yuriko; Ito Yusuke; Matsukura Satoko; Fujita Yasunari; Yoshiwara Kyouko; Ohme-Takagi Masaru; Kojima Mikiko; Sakakibara Hitoshi; Shinozaki Kazuo; Yamaguchi-Shinozaki Kazuko; Rice phytochrome-interacting factor-like protein OsPIL1 functions as a key regulator of internode elongation and induces a morphological response to drought stress. Proceedings of The National Academy of Sciences of The United States of America 2012:
PMID [22984180]

34  Ye Rongjian; Zhou Fei; Lin Yongjun; Two novel positive cis-regulatory elements involved in green tissue-specific promoter activity in rice (Oryza sativa L ssp.). Plant Cell Reports 2012:
PMID [22388917]

35  Zhang Yan; Xiao Wenkai; Luo Lijuan; Pang Jinhuan; Rong Wei; He Chaozu; Downregulation of OsPK1, a cytosolic pyruvate kinase, by T-DNA insertion causes dwarfism and panicle enclosure in rice. Planta 2012:235
PMID [21805151]

36  Ishimaru Yasuhiro; Takahashi Ryuichi; Bashir Khurram; Shimo Hugo; Senoura Takeshi; Sugimoto Kazuhiko; Ono Kazuko; Yano Masahiro; Ishikawa Satoru; Arao Tomohito; Nakanishi Hiromi; Nishizawa Naoko K; Characterizing the role of rice NRAMP5 in Manganese, Iron and Cadmium Transport. Scientific reports 2012:2
PMID [22368778]

37  Asano Takayuki; Hayashi Nagao; Kobayashi Michie; Aoki Naohiro; Miyao Akio; Mitsuhara Ichiro; Ichikawa Hiroaki; Komatsu Setsuko; Hirochika Hirohiko; Kikuchi Shoshi; Ohsugi Ryu; A rice calcium-dependent protein kinase OsCPK12 oppositely modulates salt stress tolerance and blast disease resistance. The Plant Journal 2011:
PMID [21883553]

38  Cao Hong; Guo Siyi; Xu Yunyuan; Jiang Kun; Jones Alan M; Chong Kang; Reduced expression of a gene encoding a Golgi localized monosaccharide transporter (OsGMST1) confers hypersensitivity to salt in rice (Oryza sativa). Journal of Experimental Botany 2011:
PMID [21613379]

39  Du Hao; Liu Linhong; You Lei; Yang Mei; He Yubing; Li Xianghua; Xiong Lizhong; Characterization of an inositol 1,3,4-trisphosphate 5/6-kinase gene that is essential for drought and salt stress responses in rice. Plant Molecular Biology 2011:
PMID [22038091]

40  Gao Ting; Wu Yaorong; Zhang Yiyue; Liu Lijing; Ning Yuese; Wang Dongjiang; Tong Hongning; Chen Shouyi; Chu Chengcai; Xie Qi; OsSDIR1 overexpression greatly improves drought tolerance in transgenic rice. Plant Molecular Biology 2011:
PMID [21499841]

41  Gong Chunyan; Li Tang; Li Qi; Yan Longfeng; Wang Tai; Rice OsRAD21-2 is expressed in actively dividing tissues and its ectopic expression in yeast results in aberrant cell division and growth. Journal of Integrative Plant Biology 2011:53
PMID [21205177]

42  Li Xiaojiao; Sun Lianjun; Tan Lubin; Liu Fengxia; Zhu Zuofeng; Fu Yongcai; Sun Xianyou; Sun Xuewen; Xie Daoxin; Sun Chuanqing; TH1, a DUF640 domain-like gene controls lemma and palea development in rice. Plant Molecular Biology 2011:
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43  Liu Yaju; Xu Yunyuan; Xiao Jun; Ma Qibin; Li Dan; Xue Zhen; Chong Kang; OsDOG, a gibberellin-induced A20/AN1 zinc-finger protein, negatively regulates gibberellin-mediated cell elongation in rice. Journal of Plant Physiology 2011:168
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44  Nakagawa Hitoshi; Tanaka Atsunori; Tanabata Takanari; Ohtake Miki; Fujioka Shozo; Nakamura Hidemitsu; Ichikawa Hiroaki; Mori Masaki; SHORT GRAIN 1 Decreases Organ Elongation and Brassinosteroid Response in Rice. Plant Physiology 2011:
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45  Ning Jing; Zhang Baocai; Wang Nili; Zhou Yihua; Xiong Lizhong; Increased Leaf Angle1, a Raf-Like MAPKKK That Interacts with a Nuclear Protein Family, Regulates Mechanical Tissue Formation in the Lamina Joint of Rice. The Plant Cell 2011:
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46  Qi Yanhua; Wang Suikang; Shen Chenjia; Zhang Saina; Chen Yue; Xu Yanxia; Liu Yu; Wu Yunrong; Jiang Dean; OsARF12, a transcription activator on auxin response gene, regulates root elongation and affects iron accumulation in rice (Oryza sativa). New phytologist 2011:
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47  Shimo Hugo; Ishimaru Yasuhiro; An Gynheung; Yamakawa Takashi; Nakanishi Hiromi; Nishizawa Naoko K; Low cadmium (LCD), a novel gene related to cadmium tolerance and accumulation in rice. Journal of Experimental Botany 2011:
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48  Yang Xi; Yang Ya-Nan; Xue Liang-Jiao; Zou Mei-Juan; Liu Jian-Jing; Chen Fan; Xue Hong-Wei; Rice ABI5-like1 Regulates ABA and Auxin Responses by Affecting the Expression of ABRE-Containing Genes. Plant Physiology 2011:
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49  Cho Jung-Il; Burla Bo; Lee Dae-Woo; Ryoo Nayeon; Hong Soon-Kwan; Kim Hyun-Bi; Eom Joon-Seob; Choi Sang-Bong; Cho Man-Ho; Bhoo Seong Hee; Hahn Tae-Ryong; Ekkehard Neuhaus H; Martinoia Enrico; Jeon Jong-Seong; Expression analysis and functional characterization of the monosaccharide transporters, OsTMTs, involving vacuolar sugar transport in rice (Oryza sativa). New Phytologist 2010:
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50  Fukuda Atsunori; Nakamura Atsuko; Hara Naho; Toki Seiichi; Tanaka Yoshiyuki; Molecular and functional analyses of rice NHX-type Na(+)/H (+) antiporter genes. Planta 2010:
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51  Ji Hyeonso; Kim Sung-Ryul; Kim Yul-Ho; Kim Hakbum; Eun Moo-Young; Jin Il-Doo; Cha Young-Soon; Yun Doh-Won; Ahn Byung-Ohg; Lee Myung Chul; Lee Gang-Seob; Yoon Ung-Han; Lee Jung-Sook; Lee Yeon-Hee; Suh Seok-Cheol; Jiang Wenzhu; Yang Jung-Il; Jin Ping; McCouch Susan R; An Gynheung; Koh Hee-Jong; Inactivation of the CTD phosphatase-like gene OsCPL1 enhances the development of the abscission layer and seed shattering in rice. The Plant Journal 2010:61
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52  Kobayashi Takanori; Ogo Yuko; Aung May Sann; Nozoye Tomoko; Itai Reiko Nakanishi; Nakanishi Hiromi; Yamakawa Takashi; Nishizawa Naoko K; The spatial expression and regulation of transcription factors IDEF1 and IDEF2. Annals of Botany 2010:105
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53  Matsui Hidenori; Yamazaki Muneo; Kishi-Kaboshi Mitsuko; Takahashi Akira; Hirochika Hirohiko; AGC kinase OsOxi1 positively regulates basal resistance through suppression of OsPti1a-mediated negative regulation. Plant & Cell Physiology 2010:51
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54  Ouyang Shou-Qiang; Liu Yun-Feng; Liu Peng; Lei Gang; He Si-Jie; Ma Biao; Zhang Wan-Ke; Zhang Jin-Song; Chen Shou-Yi; Receptor-like kinase OsSIK1 improves drought and salt stress tolerance in rice (Oryza sativa) plants. The Plant Journal 2010:
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55  Sun Shu-Jing; Guo Shu-Qiao; Yang Xia; Bao Yong-Mei; Tang Hai-Juan; Sun Hui; Huang Ji; Zhang Hong-Sheng; Functional analysis of a novel Cys2/His2-type zinc finger protein involved in salt tolerance in rice. Journal of Experimental Botany 2010:61
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56  Takasaki Hironori; Maruyama Kyonoshin; Kidokoro Satoshi; Ito Yusuke; Fujita Yasunari; Shinozaki Kazuo; Yamaguchi-Shinozaki Kazuko; Nakashima Kazuo; The abiotic stress-responsive NAC-type transcription factor OsNAC5 regulates stress-inducible genes and stress tolerance in rice. Molecular Genetics and Genomics 2010:284
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57  Yan Yong-Sheng; Chen Xiao-Ying; Yang Kun; Sun Zong-Xiu; Fu Ya-Ping; Zhang Yu-Man; Fang Rong-Xiang; Overexpression of an F-box Protein Gene Reduces Abiotic Stress Tolerance and Promotes Root Growth in Rice. Molecular Plant 2010:
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58  Zhu Keming; Tang Ding; Yan Changjie; Chi Zhengchang; Yu Hengxiu; Chen Jianmin; Liang Jiansheng; Gu Minghong; Cheng Zhukuan; Erect panicle2 encodes a novel protein that regulates panicle erectness in indica rice. Genetics 2010:184
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59  Aoyama Takahiro; Kobayashi Takanori; Takahashi Michiko; Nagasaka Seiji; Usuda Kanako; Kakei Yusuke; Ishimaru Yasuhiro; Nakanishi Hiromi; Mori Satoshi; Nishizawa Naoko K; OsYSL18 is a rice iron(III)-deoxymugineic acid transporter specifically expressed in reproductive organs and phloem of lamina joints. Plant Molecular Biology 2009:70
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60  Inoue Haruhiko; Kobayashi Takanori; Nozoye Tomoko; Takahashi Michiko; Kakei Yusuke; Suzuki Kazumasa; Nakazono Mikio; Nakanishi Hiromi; Mori Satoshi; Nishizawa Naoko K; Rice OsYSL15 is an iron-regulated iron(III)-deoxymugineic acid transporter expressed in the roots and is essential for iron uptake in early growth of the seedlings. The Journal of Biological Chemistry 2009:284
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61  Komatsu Setsuko; Jan Asad; Koga Yasunori; Characterization of a histidine- and alanine-rich protein showing interaction with calreticulin in rice. Amino Acids 2009:36
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62  Koo Sung Cheol; Choi Man Soo; Chun Hyun Jin; Park Hyeong Cheol; Kang Chang Ho; Shim Sang In; Chung Jong Il; Cheong Yong Hwa; Lee Sang Yeol; Yun Dae-Jin; Chung Woo Sik; Cho Moo Je; Kim Min Chul; Identification and characterization of alternative promoters of the rice MAP kinase gene OsBWMK1. Molecules and Cells 2009:27
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63  Lee Sichul; Chiecko Jeff C; Kim Sun A; Walker Elsbeth L; Lee Youngsook; Guerinot Mary Lou; An Gynheung; Disruption of OsYSL15 leads to iron inefficiency in rice plants. Plant Physiology 2009:150
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64  Li Qian-Feng; Zhang Gui-Yun; Dong Zhi-Wei; Yu Heng-Xiu; Gu Ming-Hong; Sun Samuel S M; Liu Qiao-Quan; Characterization of expression of the OsPUL gene encoding a pullulanase-type debranching enzyme during seed development and germination in rice. Plant Physiology and Biochemistry 2009:47
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65  Ma Qibin; Dai Xiaoyan; Xu Yunyuan; Guo Jing; Liu Yaju; Chen Na; Xiao Jun; Zhang Dajian; Xu Zhihong; Zhang Xiansheng; Chong Kang; Enhanced tolerance to chilling stress in OsMYB3R-2 transgenic rice is mediated by alteration in cell cycle and ectopic expression of stress genes. Plant Physiology 2009:150
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66  Shin Jun-Hye; Yoshimoto Kohki; Ohsumi Yoshinori; Jeon Jong-Seong; An Gynheung; OsATG10b, an autophagosome component, is needed for cell survival against oxidative stresses in rice. Molecules and Cells 2009:27
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67  Singh Amanjot; Sahi Chandan; Grover Anil; Chymotrypsin protease inhibitor gene family in rice: Genomic organization and evidence for the presence of a bidirectional promoter shared between two chymotrypsin protease inhibitor genes. Gene 2009:428
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68  Tanaka Atsunori; Nakagawa Hitoshi; Tomita Chikako; Shimatani Zenpei; Ohtake Miki; Nomura Takahito; Jiang Chang-Jie; Dubouzet Joseph G; Kikuchi Shoshi; Sekimoto Hitoshi; Yokota Takao; Asami Tadao; Kamakura Takashi; Mori Masaki; BRASSINOSTEROID UPREGULATED1, encoding a helix-loop-helix protein, is a novel gene involved in brassinosteroid signaling and controls bending of the lamina joint in rice. Plant Physiology 2009:151
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69  Wang Zhiye; Hu Han; Huang Hongjie; Duan Ke; Wu Zhongchang; Wu Ping; Regulation of OsSPX1 and OsSPX3 on expression of OsSPX domain genes and Pi-starvation signaling in rice. Journal of Integrative Plant Biology 2009:51
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70  Wu Xiaolan; Shiroto Yoko; Kishitani Sachie; Ito Yukihiro; Toriyama Kinya; Enhanced heat and drought tolerance in transgenic rice seedlings overexpressing OsWRKY11 under the control of HSP101 promoter. Plant Cell Reports 2009:28
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71  Zhang Lei; Tian Li-Hong; Zhao Jun-Feng; Song Yun; Zhang Cui-Jun; Guo Yi; Identification of an apoplastic protein involved in the initial phase of salt stress response in rice root by two-dimensional electrophoresis. Plant Physiology 2009:149
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72  Gutha Linga Reddy; Reddy Arjula R; Rice DREB1B promoter shows distinct stress-specific responses, and the overexpression of cDNA in tobacco confers improved abiotic and biotic stress tolerance. Plant Molecular Biology 2008:68
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73  Phean-o-pas Srivilai; Limpaseni Tipaporn; Buaboocha Teerapong; Structure and expression analysis of the OsCam1-1 calmodulin gene from Oryza sativa L. BMB Reports 2008:41
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74  Yang Wenqiang; Kong Zhaosheng; Omo-Ikerodah Edith; Xu Wenying; Li Qun; Xue Yongbiao; Calcineurin B-like interacting protein kinase OsCIPK23 functions in pollination and drought stress responses in rice (Oryza sativa L.). Journal of Genetics and Genomics 2008:35
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75  Yuan Jing; Chen Dan; Ren Yujun; Zhang Xuelian; Zhao Jie; Characteristic and expression analysis of a metallothionein gene, OsMT2b, down-regulated by cytokinin suggests functions in root development and seed embryo germination of rice. Plant Physiology 2008:146
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76  Huang Ji; Yang Xia; Wang Mei-Mei; Tang Hai-Juan; Ding Ling-Yun; Shen Yin; Zhang Hong-Sheng; A novel rice C2H2-type zinc finger protein lacking DLN-box/EAR-motif plays a role in salt tolerance. Biochimica Et Biophysica Acta 2007:1769
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77  Huang Yuemin; Xiao Benze; Xiong Lizhong; Characterization of a stress responsive proteinase inhibitor gene with positive effect in improving drought resistance in rice. Planta 2007:226
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78  Koh Serry; Lee Sang-Choon; Kim Min-Kyung; Koh Jun Ho; Lee Sichul; An Gynheung; Choe Sunghwa; Kim Seong-Ryong; T-DNA tagged knockout mutation of rice OsGSK1, an orthologue of Arabidopsis BIN2, with enhanced tolerance to various abiotic stresses. Plant Molecular Biology 2007:65
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79  Mao Chuanzao; Ding Wona; Wu Yunrong; Yu Jie; He Xiaowei; Shou Huixai; Wu Ping; Overexpression of a NAC-domain protein promotes shoot branching in rice. New Phytologist 2007:176
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80  Nakashima Kazuo; Tran Lam-Son P; Van Nguyen Dong; Fujita Miki; Maruyama Kyonoshin; Todaka Daisuke; Ito Yusuke; Hayashi Nagao; Shinozaki Kazuo; Yamaguchi-Shinozaki Kazuko; Functional analysis of a NAC-type transcription factor OsNAC6 involved in abiotic and biotic stress-responsive gene expression in rice. The Plant Journal 2007:51
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81  Xiao Benze; Huang Yuemin; Tang Ning; Xiong Lizhong; Over-expression of a LEA gene in rice improves drought resistance under the field conditions. Theoretical and Applied Genetics 2007:115
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82  Kamiya Takehiro; Akahori Taro; Ashikari Motoyuki; Maeshima Masayoshi; Expression of the vacuolar Ca2+/H+ exchanger, OsCAX1a, in rice: cell and age specificity of expression, and enhancement by Ca2+. Plant & Cell Physiology 2006:47
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83  Mao Chuanzao; Wang Shaomin; Jia Qiaojun; Wu Ping; OsEIL1, a rice homolog of the Arabidopsis EIN3 regulates the ethylene response as a positive component. Plant Molecular Biology 2006:61
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84  Kusano Hiroaki; Asano Takayuki; Shimada Hiroaki; Kadowaki Koh-Ichi; Molecular characterization of ONAC300, a novel NAC gene specifically expressed at early stages in various developing tissues of rice. Molecular Genetics and Genomics 2005:272
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85  Guan Jiahn-Chou; Jinn Tsung-Luo; Yeh Ching-Hui; Feng Shi-Pin; Chen Yih-Ming; Lin Chu-Yung; Characterization of the genomic structures and selective expression profiles of nine class I small heat shock protein genes clustered on two chromosomes in rice (Oryza sativa L.). Plant Molecular Biology 2004:56
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86  Koike Shintaro; Inoue Haruhiko; Mizuno Daichi; Takahashi Michiko; Nakanishi Hiromi; Mori Satoshi; Nishizawa Naoko K; OsYSL2 is a rice metal-nicotianamine transporter that is regulated by iron and expressed in the phloem. The Plant Journal 2004:39
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87  Yang Hui-Jun; Shen Hui; Chen Li; Xing Yan-Yan; Wang Zong-Yang; Zhang Jing-Liu; Hong Meng-Min; The OsEBP-89 gene of rice encodes a putative EREBP transcription factor and is temporally expressed in developing endosperm and intercalary meristem. Plant Molecular Biology 2002:50
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88  Joshee N; Kisaka H; Kitagawa Y; Isolation and characterization of a water stress-specific genomic gene, pwsi 18, from rice. Plant & Cell Physiology 1998:39
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Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India