S. No. |
Primary rice gene loci |
Interacting rice gene loci |
Experiment type |
Id |
Domain name/N or C term |
Amino acid involved in interaction |
Id |
Domain name/N or C term |
Bases
involved in interaction |
Reference point |
cis-elements [PLACE Id] |
1 |
AAB40291 |
- |
--- |
|
- |
- - |
- |
S000015  |
Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA) |
2 |
AAB40291 |
- |
--- |
LOC_Os05g28210 |
- |
-159 to -180 |
- |
S000299  |
Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA) |
3 |
AAB40291 |
- |
--- |
LOC_Os11g26790 |
- |
-166 to -188 |
- |
S000007  |
Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA) |
4 |
AAB40291 |
- |
--- |
|
- |
-173 to -159 |
TrSS |
|
Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA) |
5 |
AAB40291 |
- |
--- |
|
- |
- - |
- |
S000015  |
Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA) |
6 |
AAB40291 |
- |
--- |
AAB40291 |
- |
to |
- |
S000041  |
Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA) |
7 |
AAB40291 |
- |
--- |
AAB40291 |
- |
to |
- |
S000053  |
Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA) |
8 |
AAB40291 |
- |
--- |
LOC_Os05g28210 |
- |
323 to 345 |
- |
# |
Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA) |
9 |
AAB40291 |
- |
--- |
LOC_Os11g26790 |
- |
166 to 188 |
- |
S000007  |
Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA) |
10 |
AAB40291 |
- |
--- |
|
- |
- - |
- |
S000015  |
Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA) |
|
|
|
TSS - Transcriptional start site
TrSS - Translational start site |
TSS-Pu - Putative TSS by cDNA alignment
TSS-P - Predicted TSS |