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Searching for AFB77198
[dehydration responsive element binding protein 2a (DREB2A) mRNA, complete cds ] |
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Functional details
Molecular Function
S. No. |
GO Id |
GO Description |
1 |
GO:0003677 |
DNA binding |
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Biological process
Cellular component
S. No. |
GO Id |
GO Description |
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Environment details
S. No. |
EO Id |
EO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
EO:0007048 |
sodium chloride regimen |
(+) |
2 |
EO:0007105 |
abscisic acid regimen |
(+) |
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Metabolic Pathway details
QTL details
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Plant developmental stage / tissue details
Plant development stage
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
1 |
MCP:1000107 |
post-germination stage |
(+) |
2 |
MCP:1000518 |
seedling development stage |
(+) |
Plant tissue/organ
Others
S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
Not found |
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Trait details
Physical interaction details
Interaction type: protein-protein
Interaction type: protein-DNA
S. No. |
Primary rice gene loci |
Interacting rice gene loci |
Experiment type |
Id |
Domain name/N or C term |
Amino acid involved in interaction |
Id |
Domain name/N or C term |
Bases
involved in interaction |
Reference point |
cis-elements [PLACE Id] |
1 |
AFB77198 |
- |
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- - |
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S000153  |
Protein-DNA interaction analysis : Electrophoretic Mobility Shift Assay (EMSA) |
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TSS - Transcriptional start site
TrSS - Translational start site |
TSS-Pu - Putative TSS by cDNA alignment
TSS-P - Predicted TSS |
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Related publications [Sorted by year] |
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1 |
Zhang Xiu-Xiang; Tang Yu-Juan; Ma Qi-Bin; Yang Cun-Yi; Mu Ying-Hui; Suo Hai-Cui; Luo Lai-Hui; Nian Hai; OsDREB2A, a Rice Transcription Factor, Significantly Affects Salt Tolerance in Transgenic Soybean. PloS one 2013:8
PMID [24376625]
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