Rice gene details
Searching for AK070533 [cDNA clone:J023060B22 ]

Functional details
Molecular Function
S. No. GO Id GO Description
Biological process
S. No. GO Id GO Description
1 GO:0043903 "regulation of symbiosis, encompassing mutualism through parasitism"  
Cellular component
S. No. GO Id GO Description

Environment details
S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity
1 EO:0007102 nitrogen fertilizer regimen (+)
2 MCE:1000061 low nitrogen nutrient (+)

Metabolic Pathway details
Not found

QTL details
Not found

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000521 mature plant stage (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0000003 whole plant (+)
2 PO:0009005 root (+)
3 PO:0009006 shoot system (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
S. No. TO Id TO Description Presence(+) or absence(-) of gene expression /activity
1 MCT:1000544 methane efflux (+)
2 MCT:1000545 methane concentration in soil water (+)
3 MCT:1000558 methane assimilation (+)
4 TO:0000207 plant height (+)
5 TO:0000346 tiller number (+)
6 TO:0000466 carbon content (-)
7 TO:0000571 shoot fresh weight (+)
8 TO:0020093 nitrogen content (+)

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

1  Bao Zhihua; Watanabe Aya; Sasaki Kazuhiro; Okubo Takashi; Tokida Takeshi; Liu Dongyan; Ikeda Seishi; Imaizumi-Anraku Haruko; Asakawa Susumu; Sato Tadashi; Mitsui Hisayuki; Minamisawa Kiwamu; A Rice Gene for Microbial Symbiosis, Oryza sativa CCaMK, Reduces CH4 Flux in a Paddy Field with Low Nitrogen Input. Applied and environmental microbiology 2014:80
PMID [24441161]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India