Rice gene details Home Browse Search Contact Us Feedback Links Searching for LOC_Os01g67820 [exo70 exocyst complex subunit domain containing protein, expressed ] Basic information [Pfam DB] Graphical representation of the protein domains S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name 1 LOC_Os01g67820.1 593 235 579 PF03081.7 Exo70   The basic information is from RGAP and Pfam/InterPro databases Gene model (download) IR64 N22 Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change] N22 Flag-leaf FC   17 N22InfloresenceFC   -7 N22 Root FC   2 IR64 Flag-leaf FC   2 IR64InfloresenceFC   14 IR64 Root FC   -1 Functional details Molecular Function S. No. GO Id GO Description Biological process S. No. GO Id GO Description 1 GO:0046688 response to copper ion   2 GO:0006810 transport (RGAP) 3 GO:0009987 cellular process (RGAP) Cellular component S. No. GO Id GO Description 1 GO:0005737 cytoplasm (RGAP) Environment details S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity 1 MCE:1000045 cupric chloride regimen (CuCl2) (+) Metabolic Pathway details Not found QTL details S. No. QTL Id QTL Associated Trait 1 AQHH058 elongation ability 2 AQFF020 harvest index 3 AQGI250 total biomass yield 4 AQGI255 total biomass yield 5 AQGI070 root dry weight 6 AQCY031 1000-seed weight 7 AQAG025 grain number 8 AQAE013 plant height 9 AQAB074 spikelet number 10 AQAB048 spikelet number 11 AQFD013 tiller bud dormancy 12 DQC1 tiller number 13 AQO023 root to shoot ratio 14 AQO006 biomass yield 15 AQHE130 plant height 16 AQD039 relative water content 17 AQAW022 panicle number 18 AQAW021 panicle number 19 AQFE103 grain shattering 20 AQED042 1000-seed weight 21 AQED041 1000-seed weight 22 EQA0001 seed dormancy 23 AQFJ039 panicle length 24 AQFJ035 1000-seed weight 25 AQFF073 plant height 26 AQFF077 plant height 27 AQFF071 plant height 28 AQFF068 plant height 29 AQFF064 panicle number 30 AQFF059 panicle number 31 AQFF054 panicle number 32 AQFF049 panicle number 33 AQFF045 panicle number 34 AQEI044 leaf senescence 35 CQAS7 spikelet density 36 CQAS6 spikelet number 37 CQAS5 panicle number 38 CQAS4 panicle length 39 CQAS3 days to maturity 40 AQEE013 head rice 41 AQED026 panicle number 42 AQEP001 seedling vigor 43 CQAQ3 plant height 44 CQAX15 plant height 45 CQAX1 plant height 46 CQAV1 osmotic adjustment capacity 47 AQFE094 plant height 48 AQFE093 plant height 49 AQCN022 rice yellow mottle virus resistance 50 AQCN021 rice yellow mottle virus resistance 51 AQCN020 rice yellow mottle virus resistance 52 AQCN019 rice yellow mottle virus resistance 53 AQCN018 rice yellow mottle virus resistance 54 AQCN017 rice yellow mottle virus resistance 55 AQCN016 rice yellow mottle virus resistance 56 AQCN002 tiller number 57 AQCN003 days to heading 58 AQCN001 plant height 59 AQEP008 seedling vigor 60 AQEP007 seedling vigor 61 AQEA012 plant height 62 AQEA013 plant height 63 AQEA011 plant height 64 AQEA010 plant height 65 AQEA009 plant height 66 AQEA008 plant height 67 AQEA007 plant height 68 AQEA006 plant height 69 AQEA005 plant height 70 AQEA004 plant height 71 AQEA003 plant height 72 AQEA002 plant height 73 AQEA001 plant height 74 AQDV054 1000-seed weight 75 AQDV045 panicle length 76 AQDV041 plant height 77 AQDV038 panicle exsertion 78 AQDV015 harvest index 79 AQDV026 panicle number 80 AQDV008 days to heading 81 AQAS002 plant height 82 DQF9 penetrated root thickness 83 DQE46 relative water content 84 DQE45 relative water content 85 DQE13 leaf rolling 86 DQE12 leaf rolling 87 CQV6 plant height 88 CQV5 plant height 89 CQV3 plant height 90 CQV4 plant height 91 CQV19 plant height 92 CQV15 plant height 93 CQV12 plant height 94 CQV1 plant height 95 CQQ6 root weight 96 CQQ33 plant height 97 CQQ32 root weight 98 CQQ13 root dry weight to tiller number ratio 99 CQAI6 plant height 100 CQAI3 plant height 101 CQAB9 plant height 102 CQAI1 plant height 103 CQAB8 plant height 104 CQAB7 plant height 105 CQAB6 plant height 106 CQAB5 plant height 107 CQAB4 plant height 108 CQAB11 plant height 109 CQAB10 plant height 110 AQFE051 panicle length 111 AQFE050 panicle length 112 AQFE049 panicle length 113 AQFE006 days to heading 114 AQFE005 days to heading 115 AQDH001 seed length 116 AQBE049 tiller number 117 AQBE048 tiller number 118 AQBE047 tiller number 119 AQBE046 tiller number 120 AQBE012 tiller number 121 AQBE011 tiller number 122 AQBE010 tiller number 123 AQBE009 tiller number 124 AQBE007 tiller number 125 AQBE008 tiller number 126 AQBE006 tiller number 127 AQBE005 tiller number 128 AQBC076 leaf length 129 AQBE004 tiller number 130 AQBC075 leaf length 131 AQBC037 tiller number 132 AQBC074 leaf length 133 AQBC036 tiller number 134 AQBC025 panicle number 135 AQBC035 tiller number 136 AQBC024 panicle number 137 AQBC005 plant height 138 AQBC023 panicle number 139 AQBC004 plant height 140 AQBC003 plant height 141 AQBC002 plant height 142 AQBC001 plant height 143 AQBB038 plant height 144 AQBB037 plant height 145 AQBB036 plant height 146 AQBB035 plant height 147 AQBB034 plant height 148 AQBB033 plant height 149 AQBB032 plant height 150 AQBB031 plant height 151 AQBB030 plant height 152 AQBB029 plant height 153 AQBB028 plant height 154 AQBB027 plant height 155 AQBB026 plant height 156 AQBB025 plant height 157 AQBB024 plant height 158 AQBB023 plant height 159 AQBB022 plant height 160 AQBB021 plant height 161 AQBB020 plant height 162 AQBB019 plant height 163 AQBB018 plant height 164 AQBB017 plant height 165 AQBB015 plant height 166 AQBB016 plant height 167 AQBB014 plant height 168 AQBB012 plant height 169 AQBB013 plant height 170 AQBB011 plant height 171 AQBB010 plant height 172 AQBB009 plant height 173 AQBB008 plant height 174 AQBB007 plant height 175 AQBB006 plant height 176 AQBB005 plant height 177 AQBB004 plant height 178 AQBB003 plant height 179 AQBB002 plant height 180 AQBB001 plant height 181 CQZ2 plant height 182 AQDQ008 plant height 183 CQP2 culm length 184 CQP1 cold tolerance 185 AQY005 plant height 186 AQY001 plant height 187 AQQ011 tiller number 188 AQQ005 grain yield 189 AQQ001 grain yield 190 AQCY001 grain yield 191 AQAI019 large vascular bundle number 192 AQAF016 blast disease resistance 193 AQAF015 blast disease resistance 194 AQAB061 large vascular bundle number 195 AQAB021 large vascular bundle number 196 AQJ011 grain yield 197 AQJ008 spikelet sterility 198 AQJ002 plant height 199 AQG017 biomass yield 200 AQG009 panicle number 201 AQG007 panicle exsertion 202 AQG005 panicle length 203 AQG001 plant height 204 AQFF075 plant height 205 AQGC035 penetrated root length 206 AQGC022 penetrated root thickness 207 AQFR044 seedling vigor 208 AQFR014 seedling vigor 209 AQGI118 biomass yield 210 AQAI026 leaf area to spikelet number ratio 211 AQAF014 blast disease resistance 212 AQAF013 blast disease resistance 213 AQAF012 blast disease resistance 214 AQAE004 leaf length 215 CQAX30 plant height 216 AQJ004 panicle number 217 CQX5 culm length 218 CQX22 internode length 219 CQX17 internode length 220 AQBV009 leaf angle 221 AQCU132 leaf length 222 AQAQ008 blast disease resistance 223 CQN1 nadh-dependent glutamate synthase content 224 CQN4 soluble protein content 225 AQCS004 ultraviolet-b resistance 226 AQED013 plant height 227 AQED012 plant height 228 CQAE5 plant height 229 CQAE24 grain yield per plant 230 CQAE20 1000-grain weight 231 CQAE19 1000-grain weight 232 CQAE15 grain number 233 AQBK040 seed number 234 AQCS001 ultraviolet-b resistance 235 CQG1 adaxial stomatal frequency 236 CQN49 spikelet number 237 CQN3 soluble protein content 238 CQE3 plant height 239 CQE2 plant height Plant developmental stage / tissue details Plant development stage S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity Not found Plant tissue/organ S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity 1 PO:0000025 root tip (+) 2 PO:0009005 root (+) Others S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity Not found Trait details Not found Physical interaction details Interaction type: protein-protein Not found Interaction type: protein-DNA Not found Related publications [Sorted by year] 1  Lin Chung-Yi; Trinh Ngoc Nam; Fu Shih-Feng; Hsiung Yu-Chyuan; Chia Li-Chiao; Lin Chung-Wen; Huang Hao-Jen; Comparison of early transcriptome responses to copper and cadmium in rice roots. Plant molecular biology 2013: PMID [23400832] Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India