Rice gene details Home Browse Search Contact Us Feedback Links Searching for LOC_Os02g53420 [DnaK family protein, putative, expressed ] Functional details Molecular Function S. No. GO Id GO Description 1 GO:0000166 nucleotide binding (RGAP) Biological process S. No. GO Id GO Description 1 GO:0006309 DNA fragmentation involved in apoptotic nuclear change   2 GO:0006950 response to stress   3 GO:0006979 response to oxidative stress   4 GO:0009408 response to heat   5 GO:0010039 response to iron ion   6 GO:0010106 cellular response to iron ion starvation   7 GO:0010918 positive regulation of mitochondrial membrane potential   8 GO:0043069 negative regulation of programmed cell death   9 GO:0060623 regulation of chromosome condensation   10 GO:0090201 negative regulation of release of cytochrome c from mitochondria   11 GO:2000378 negative regulation of reactive oxygen species metabolic process   12 GO:0019538 protein metabolic process (RGAP) 13 GO:0009987 cellular process (RGAP) 14 GO:0006950 response to stress (RGAP) 15 GO:0009628 response to abiotic stimulus (RGAP) 16 GO:0008150 biological_process (RGAP) 17 GO:0009607 response to biotic stimulus (RGAP) Cellular component S. No. GO Id GO Description 1 GO:0005739 mitochondrion (RGAP) 2 GO:0016020 membrane (RGAP) 3 GO:0005773 vacuole (RGAP) 4 GO:0005618 cell wall (RGAP) 5 GO:0009536 plastid (RGAP) Environment details S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity 1 EO:0007048 sodium chloride regimen (+) 2 EO:0007105 abscisic acid regimen (+) 3 EO:0007173 warm/hot temperature regimen (+) 4 EO:0007242 iron nutrient regimen (+) 5 EO:0007332 cold air temperature regimen (+) 6 EO:0007415 hydrogen peroxide (+) 7 MCE:1000008 methyl viologen (MV) (+) 8 MCE:1000075 recovery treatment (+) 9 MCE:1000143 iron deficiency treatment (+) 10 MCE:1000203 dark regimen (+) Metabolic Pathway details Not found QTL details S. No. QTL Id QTL Associated Trait 1 AQE012 filled grain number 2 AQQ006 grain yield 3 AQQ002 grain yield 4 AQEX029 total biomass yield 5 AQEX022 root dry weight 6 AQEX016 biomass yield 7 AQCB015 seed set percent 8 AQFE070 100-grain weight 9 AQFE069 100-grain weight 10 CQAB18 plant height 11 CQAB17 plant height 12 CQAB16 plant height 13 CQAB15 plant height 14 AQBC008 plant height 15 AQBC007 plant height 16 AQBC006 plant height 17 AQBB071 plant height 18 AQBB070 plant height 19 AQBB069 plant height 20 AQBB068 plant height 21 AQBB066 plant height 22 AQBB067 plant height 23 AQBB065 plant height 24 AQBB063 plant height 25 AQBB064 plant height 26 AQBB062 plant height 27 AQBB061 plant height 28 AQBB060 plant height 29 AQBB059 plant height 30 AQBB057 plant height 31 AQBB058 plant height 32 AQBB056 plant height 33 AQBB055 plant height 34 AQBB054 plant height 35 AQBB052 plant height 36 AQBB053 plant height 37 AQBB051 plant height 38 AQBB050 plant height 39 AQBB049 plant height 40 AQBB048 plant height 41 AQBB047 plant height 42 AQBB046 plant height 43 AQBB045 plant height 44 AQBB044 plant height 45 AQBB043 plant height 46 AQBB042 plant height 47 AQBB041 plant height 48 AQBB040 plant height 49 AQBB039 plant height 50 AQJ005 panicle number 51 AQO089 root number 52 AQO070 root length 53 CQE14 days to heading 54 AQCK006 days to heading 55 AQFQ002 primary branch 56 AQFQ001 flower number 57 AQDQ014 panicle length 58 AQDQ012 plant height 59 AQDQ013 panicle length 60 AQDQ010 plant height 61 AQDQ011 plant height 62 AQFE114 tiller angle 63 AQED049 grain yield per plant 64 AQED031 grain number 65 AQCR002 grain yield 66 AQFE052 panicle length 67 AQED039 grain number 68 AQEO014 seed width 69 AQDS077 plant height 70 CQN59 spikelet weight 71 AQEB010 1000-seed weight 72 AQEB005 1000-seed weight 73 AQEB001 1000-seed weight 74 CQE13 grain number 75 AQEE020 crushed grain percentage 76 AQFA005 amylose content 77 CQAX31 plant height 78 CQAX27 plant height 79 CQAX28 plant height 80 AQBK012 days to heading 81 CQAA17 relative phosphorus distribution between shoot and root 82 CQAA16 relative phosphorus distribution between shoot and root 83 AQE024 grain yield per plant Plant developmental stage / tissue details Plant development stage S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity 1 MCP:1000518 seedling development stage (+) Plant tissue/organ S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity 1 PO:0000006 plant protoplast (+) 2 PO:0008037 seedling (+) 3 PO:0009005 root (+) 4 PO:0025034 leaf (+) Others S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity Not found Trait details S. No. TO Id TO Description Presence(+) or absence(-) of gene expression /activity 1 MCT:1000078 DNA fragmentation (+) 2 MCT:1000237 dead protoplast percentage (+) 3 MCT:1000240 chromatin condensation (+) Physical interaction details Interaction type: protein-protein Not found Interaction type: protein-DNA Not found Related publications [Sorted by year] 1  Liang Xuejiao; Qin Lu; Liu Peiwei; Wang Meihuan; Ye Hong; Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37 PMID [24028141] 2  Sarkar Neelam K; Kundnani Preeti; Grover Anil; Functional analysis of Hsp70 superfamily proteins of rice (Oryza sativa). Cell Stress & Chaperones 2012: PMID [23264228] 3  Qi Yaocheng; Wang Hongjuan; Zou Yu; Liu Cheng; Liu Yanqi; Wang Ying; Zhang Wei; Over-expression of mitochondrial heat shock protein 70 suppresses programmed cell death in rice. FEBS Letters 2011:585 PMID [21130768] Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India