Rice gene details
Searching for LOC_Os02g56380 [OsWAK21 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed ]
Basic information [Pfam DB] Graphical representation of the protein domains
S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name
1 LOC_Os02g56380.1 403 78 348 PF00069.17 Pkinase
  The basic information is from RGAP and Pfam/InterPro databases

Gene model (download)
IR64 N22
Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
N22 Flag-leaf FC
  3
N22InfloresenceFC
  -5
N22 Root FC
  -84
IR64 Flag-leaf FC
 
IR64InfloresenceFC
  9
IR64 Root FC
  -6

Functional details
Molecular Function
Not found
1 GO:0016301 kinase activity (RGAP)
2 GO:0005515 protein binding (RGAP)
Biological process
Not found
1 GO:0006464 protein modification process (RGAP)
Cellular component
Not found
1 GO:0005886 plasma membrane (RGAP)

Environment details
Not found

Metabolic Pathway details
Not found

QTL details
S. No. QTL Id QTL Associated Trait
1 CQN6 nadh-dependent glutamate synthase content
2 CQAO17 spikelet density
3 CQAE7 plant height
4 CQAE16 grain number
5 AQBC009 plant height
6 AQFR024 seedling vigor
7 AQFR016 seedling vigor
8 AQCU121 days to heading
9 AQCU116 days to heading
10 AQCU035 panicle length
11 AQCU023 leaf length
12 AQBT001 bacterial blight disease resistance
13 AQGS025 seed weight
14 AQGS017 grain number
15 AQGS011 spikelet number
16 AQGS008 panicle length
17 AQE012 filled grain number
18 AQQ006 grain yield
19 AQQ002 grain yield
20 AQEX029 total biomass yield
21 AQEX022 root dry weight
22 AQEX016 biomass yield
23 AQCB015 seed set percent
24 AQED049 grain yield per plant
25 AQED031 grain number
26 AQCR002 grain yield
27 CQN59 spikelet weight
28 AQEB010 1000-seed weight
29 AQEB005 1000-seed weight
30 AQEB001 1000-seed weight
31 AQFA005 amylose content
32 CQAX27 plant height
33 AQBK012 days to heading
34 AQE024 grain yield per plant

Plant developmental stage / tissue details
Plant development stage
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 MCP:1000518 seedling development stage (+)
Plant tissue/organ
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
1 PO:0009005 root (+)
Others
S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity
Not found

Trait details
Not found

Physical interaction details
Interaction type: protein-protein
Not found
Interaction type: protein-DNA
Not found
Related publications [Sorted by year]

1  Redillas Mark C F R; Jeong Jin S; Kim Youn S; Jung Harin; Bang Seung W; Choi Yang D; Ha Sun-Hwa; Reuzeau Christophe; Kim Ju-Kon; The overexpression of OsNAC9 alters the root architecture of rice plants enhancing drought resistance and grain yield under field conditions. Plant biotechnology journal 2012:10
PMID [22551450]


Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India