Rice gene details Home Browse Search Contact Us Feedback Links Searching for LOC_Os03g02260 [DnaK family protein, putative, expressed ] Basic information [Pfam DB] Graphical representation of the protein domains S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name 1 LOC_Os03g02260.1 677 54 649 PF00012.12 HSP70   The basic information is from RGAP and Pfam/InterPro databases Gene model (download) IR64 N22 Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change] N22 Flag-leaf FC   3 N22InfloresenceFC   4 N22 Root FC   38 IR64 Flag-leaf FC   3 IR64InfloresenceFC   2 IR64 Root FC   2 Functional details Molecular Function S. No. GO Id GO Description 1 GO:0000166 nucleotide binding (RGAP) Biological process S. No. GO Id GO Description 1 GO:0006950 response to stress   2 GO:0009408 response to heat   3 GO:0009412 response to heavy metal   4 GO:0009737 response to abscisic acid stimulus   5 GO:0010039 response to iron ion   6 GO:0010044 response to aluminum ion   7 GO:0010288 response to lead ion   8 GO:0019538 protein metabolic process (RGAP) 9 GO:0009987 cellular process (RGAP) 10 GO:0006950 response to stress (RGAP) 11 GO:0009628 response to abiotic stimulus (RGAP) 12 GO:0008150 biological_process (RGAP) 13 GO:0009607 response to biotic stimulus (RGAP) Cellular component S. No. GO Id GO Description 1 GO:0005739 mitochondrion (RGAP) 2 GO:0016020 membrane (RGAP) 3 GO:0005773 vacuole (RGAP) 4 GO:0005618 cell wall (RGAP) 5 GO:0009536 plastid (RGAP) Environment details S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity 1 EO:0007048 sodium chloride regimen (+) 2 EO:0007105 abscisic acid regimen (+) 3 EO:0007173 warm/hot temperature regimen (+) 4 EO:0007242 iron nutrient regimen (+) 5 EO:0007332 cold air temperature regimen (+) 6 MCE:1000138 lead nitrate regimen (+) 7 MCE:1000222 aluminium chloride regimen (AlCl3) (+) Metabolic Pathway details Not found QTL details S. No. QTL Id QTL Associated Trait 1 AQFC001 elongation ability 2 CQE15 chlorophyll content 3 AQBI004 pollen fertility 4 AQFW219 leaf width 5 AQFW157 leaf width 6 AQFW095 leaf width 7 AQFW055 days to heading 8 AQFW039 days to heading 9 AQFW020 plant height 10 AQFW031 plant height 11 AQFW002 days to heading 12 AQFW007 plant height 13 AQCU104 spikelet fertility 14 AQCU003 days to heading 15 AQCU002 days to heading 16 AQCU001 days to heading 17 AQBT004 bacterial blight disease resistance 18 AQBT003 bacterial blight disease resistance 19 AQBT002 bacterial blight disease resistance 20 AQEK001 iron sensitivity 21 CQAR8 spikelet density 22 CQAR7 tiller number 23 AQDQ027 panicle length 24 AQDQ026 plant height 25 AQDQ025 plant height 26 AQDQ024 plant height 27 AQCN005 days to heading 28 CQAX17 plant height 29 CQAX32 plant height 30 AQEN003 blast disease resistance 31 AQFF025 days to flower 32 AQFF026 days to flower 33 AQFF024 days to flower 34 AQFF022 days to flower 35 AQFF023 days to flower 36 AQFF021 harvest index 37 AQFF019 harvest index 38 AQFF018 harvest index 39 AQFF017 harvest index 40 AQFF016 harvest index 41 DQF6 root penetration index 42 DQF10 penetrated root thickness 43 DQE48 relative water content 44 DQE36 relative growth rate 45 CQAX4 plant height 46 CQAI46 root dry weight 47 CQAI38 root volume 48 AQEN012 blast disease resistance 49 AQEA200 days to heading 50 AQEA201 days to heading 51 AQEA199 days to heading 52 AQEA198 days to heading 53 AQEA197 days to heading 54 AQEA196 days to heading 55 AQEA195 days to heading 56 AQEA194 days to heading 57 AQEA193 days to heading 58 AQEA192 days to heading 59 AQEA191 days to heading 60 AQEA190 days to heading 61 AQDV009 days to heading 62 AQEA189 days to heading 63 AQDR011 grain number 64 AQDR003 1000-seed weight 65 AQDQ023 spikelet number 66 AQBV008 leaf angle 67 AQBE054 tiller number 68 AQAS007 days to maturity 69 AQAS001 days to flower 70 CQAE2 days to heading Plant developmental stage / tissue details Plant development stage S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity 1 MCP:1000518 seedling development stage (+) Plant tissue/organ S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity 1 PO:0008037 seedling (+) 2 PO:0009005 root (+) 3 PO:0025034 leaf (+) Others S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity Not found Trait details Not found Physical interaction details Interaction type: protein-protein Not found Interaction type: protein-DNA Not found Related publications [Sorted by year] 1  Liang Xuejiao; Qin Lu; Liu Peiwei; Wang Meihuan; Ye Hong; Genes for iron-sulphur cluster assembly are targets of abiotic stress in rice, Oryza sativa. Plant, cell & environment 2014:37 PMID [24028141] 2  Sarkar Neelam K; Kundnani Preeti; Grover Anil; Functional analysis of Hsp70 superfamily proteins of rice (Oryza sativa). Cell Stress & Chaperones 2012: PMID [23264228] Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India