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Searching for LOC_Os03g48770 
[Cupin domain containing protein, expressed ] |
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| Basic information [Pfam DB] |
Graphical representation of the protein domains |
| S. No. |
Locus Id |
Protein Length |
Doman Start |
Domain End |
Pfam ID |
Domain Name |
| 1 |
LOC_Os03g48770.1 |
228 |
65 |
217 |
PF00190.14 |
Cupin_1 |
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The basic information is from RGAP and Pfam/InterPro databases |
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Gene model (download) 
IR64 N22
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Gene Expression
(RNASeq data) in two varieties N22 & IR64 [FC=Fold Change]
| N22 Flag-leaf FC |
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| N22InfloresenceFC |
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| N22 Root FC |
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| IR64 Flag-leaf FC |
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| IR64InfloresenceFC |
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| IR64 Root FC |
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Functional details
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Molecular Function
Biological process
Cellular component
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Environment details
Metabolic Pathway details
QTL details
| S. No. |
QTL Id |
QTL Associated Trait |
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| 1 |
CQE18 |
yield |
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| 2 |
CQAS27 |
plant height |
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| 3 |
CQE26 |
carbon content |
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| 4 |
CQE27 |
grain number |
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| 5 |
CQF5 |
soluble protein content |
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Plant developmental stage / tissue details
Plant development stage
| S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
| 1 |
MCP:1000518 |
seedling development stage |
(+) |
Plant tissue/organ
| S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
| 1 |
PO:0009005 |
root |
(+) |
Others
| S. No. |
PO Id |
PO Description |
Presence(+) or absence(-) of gene expression /activity |
| Not found |
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Trait details
Physical interaction details
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Interaction type: protein-protein
Interaction type: protein-DNA
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| Related publications [Sorted by year] |
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| 1 |
Jeong Jin Seo; Kim Youn Shic; Redillas Mark C F R; Jang Geupil; Jung Harin; Bang Seung Woon; Choi Yang Do; Ha Sun-Hwa; Reuzeau Christophe; Kim Ju-Kon; OsNAC5 overexpression enlarges root diameter in rice plants leading to enhanced drought tolerance and increased grain yield in the field. Plant biotechnology journal 2012:
PMID [23094910]
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