Rice gene details Home Browse Search Contact Us Feedback Links Searching for LOC_Os05g45240 [flavin monooxygenase, putative ] Basic information [Pfam DB] Graphical representation of the protein domains S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name 1 LOC_Os05g45240.1 349 9 36 PF01494.11 FAD_binding_3   The basic information is from RGAP and Pfam/InterPro databases Gene model (download) IR64 N22 Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change] N22 Flag-leaf FC   -1 N22InfloresenceFC   -2 N22 Root FC   6 IR64 Flag-leaf FC IR64InfloresenceFC   -3 IR64 Root FC   1 Functional details Molecular Function Not found 1 GO:0000166 nucleotide binding (RGAP) 2 GO:0005488 binding (RGAP) 3 GO:0003824 catalytic activity (RGAP) Biological process Not found 1 GO:0008152 metabolic process (RGAP) 2 GO:0009058 biosynthetic process (RGAP) 3 GO:0009987 cellular process (RGAP) Cellular component Not found Environment details S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity 1 MCE:1000103 fluridone (+) Metabolic Pathway details S. No. Pathway Id Pathway Description 1 PWY66-201 nicotine degradation II QTL details S. No. QTL Id QTL Associated Trait 1 AQBK013 days to heading 2 CQAS62 1000-seed weight 3 AQFP018 culm strength 4 AQBK016 days to heading 5 AQEP016 seedling vigor 6 AQE042 grain yield per panicle 7 CQX28 internode length 8 AQGI228 total biomass yield 9 AQHR014 tiller number 10 AQAD001 sheath blight disease resistance 11 AQAG034 1000-seed weight 12 AQAI021 large vascular bundle number 13 AQCQ022 grain yield per plant 14 CQAJ20 grain number 15 AQBK015 days to heading 16 AQBK018 days to heading 17 CQAA19 relative phosphorus distribution between shoot and root 18 AQDZ002 lodging incidence 19 AQDZ013 lodging incidence 20 CQAS53 plant height 21 AQBK017 days to heading 22 CQAA18 relative phosphorus distribution between shoot and root 23 AQX002 primary branch 24 CQAE10 plant height 25 AQAP043 brown planthopper resistance 26 AQCE028 primary branch length 27 AQCU197 plant height 28 AQCU212 leaf length 29 AQFW218 leaf width 30 AQFU013 milled rice ratio 31 CQAG23 setback 32 AQBV012 leaf angle 33 AQBV013 tiller angle 34 AQBV014 leaf angle 35 AQHF007 leaf width 36 AQBC050 panicle tiller ratio 37 AQBC051 panicle tiller ratio 38 AQBC052 panicle tiller ratio 39 AQEA231 days to heading 40 AQEA232 days to heading 41 AQEA233 days to heading 42 AQEA234 days to heading 43 AQEA235 days to heading 44 AQEA236 days to heading 45 AQEA237 days to heading 46 AQEP005 seedling vigor 47 AQDX008 osmotic adjustment capacity 48 AQFE096 plant height 49 AQFE097 plant height 50 AQEJ075 leaf area 51 AQEJ077 root activity 52 CQAS63 spikelet number 53 CQAS54 days to heading Plant developmental stage / tissue details Plant development stage S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity 1 PO:0007098 LP.02 two leaves visible (+) Plant tissue/organ S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity 1 PO:0000003 whole plant (+) 2 PO:0025034 leaf (+) Others S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity Not found Trait details Not found Physical interaction details Interaction type: protein-protein Not found Interaction type: protein-DNA Not found Related publications [Sorted by year] 1  Du Hao; Wu Nai; Chang Yu; Li Xianghua; Xiao Jinghua; Xiong Lizhong; Carotenoid deficiency impairs ABA and IAA biosynthesis and differentially affects drought and cold tolerance in rice. Plant molecular biology 2013:83 PMID [23846670] Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India