Rice gene details Home Browse Search Contact Us Feedback Links Searching for LOC_Os08g29110 [thioredoxin, putative, expressed ] Functional details Molecular Function Not found 1 GO:0003824 catalytic activity (RGAP) Biological process Not found 1 GO:0016043 cellular component organization (RGAP) 2 GO:0009987 cellular process (RGAP) 3 GO:0008152 metabolic process (RGAP) 4 GO:0019725 cellular homeostasis (RGAP) Cellular component Not found 1 GO:0009579 thylakoid (RGAP) 2 GO:0005622 intracellular (RGAP) 3 GO:0009536 plastid (RGAP) Environment details S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity 1 EO:0007069 gibberellic acid regimen (-) 2 EO:0007196 light regimen (-) 3 EO:0007204 1-naphthaleneacetic acid (-) 4 EO:0007290 kinetin regimen (-) 5 MCE:1000203 dark regimen (-) Metabolic Pathway details Not found QTL details S. No. QTL Id QTL Associated Trait 1 CQN39 leaf senescence 2 AQBK019 days to heading 3 CQAP1 scent 4 CQN20 soluble protein content 5 CQN37 leaf senescence 6 CQN38 leaf senescence 7 CQAS102 spikelet number 8 CQAS103 seed number 9 CQAS104 yield 10 CQAS92 plant height 11 CQAS93 days to heading 12 CQAS94 days to maturity 13 CQAS97 spikelet number 14 CQAS98 spikelet density 15 CQAS99 seed number 16 AQCF042 filled grain number 17 AQCF043 spikelet number 18 AQDQ051 spikelet number 19 AQDQ052 plant height 20 AQDQ053 panicle length 21 AQDQ054 panicle length 22 CQAX35 plant height 23 CQAS96 panicle number 24 AQBK001 days to heading 25 CQAS100 seed set percent 26 CQAS101 1000-seed weight 27 CQAS95 panicle length 28 CQC6 days to heading 29 AQGD022 awn length 30 CQE65 plant height 31 CQE66 plant height 32 AQAL029 root thickness 33 AQFW094 leaf length 34 AQBJ026 primary branch 35 AQBJ029 primary branch 36 AQAP031 brown planthopper resistance 37 AQCU048 spikelet fertility 38 AQCU067 plant height 39 AQFW004 days to heading 40 AQFW040 days to heading 41 AQFW051 leaf width 42 AQFW056 days to heading 43 AQFW065 leaf width 44 AQFW080 days to heading 45 AQCE030 primary branch length 46 AQCE039 primary branch 47 AQFR029 seedling vigor 48 AQAP008 brown planthopper resistance 49 AQAP009 brown planthopper resistance 50 AQAP010 brown planthopper resistance 51 AQAP033 brown planthopper resistance 52 AQCU113 days to heading 53 AQCU174 spikelet fertility 54 AQCU224 leaf width 55 AQFW128 spikelet fertility 56 AQFV020 seedling vigor 57 AQFV021 seedling vigor 58 AQFV022 seedling vigor 59 AQFW035 leaf width 60 AQDI005 hybrid incompatibilty 61 CQAR33 days to heading 62 CQAR34 plant height 63 CQAR35 spikelet number 64 CQB29 1000-grain weight 65 AQFA019 brown rice protein 66 AQBS019 plant height 67 AQBS026 panicle length 68 AQBS046 grain number 69 AQBS067 grain yield per panicle 70 AQCV029 chalkiness of endosperm 71 CQAL15 grain width 72 CQE67 plant height 73 AQAI043 leaf area to spikelet number ratio 74 AQBC065 tiller angle 75 AQBC066 tiller angle 76 AQBC067 tiller angle 77 AQBC068 tiller angle 78 AQDP005 iron sensitivity 79 AQEA262 days to heading 80 AQEA263 days to heading 81 AQEA264 days to heading 82 AQEA265 days to heading 83 AQEA266 days to heading 84 AQEA267 days to heading 85 AQEA268 days to heading 86 AQEA269 days to heading 87 AQEA270 days to heading 88 AQEA271 days to heading 89 AQEA272 days to heading 90 CQK10 panicle number 91 CQL8 relative root length 92 CQL9 relative root length 93 AQFF044 spikelet sterility 94 CQAV6 osmotic adjustment capacity 95 CQAV7 osmotic adjustment capacity 96 CQAV9 osmotic adjustment capacity 97 CQAW25 tiller number 98 CQAW26 root number 99 AQDQ055 filled grain number Plant developmental stage / tissue details Plant development stage S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity 1 MCP:1000107 post-germination stage (-) 2 MCP:1000110 1 day pre-heading stage (-) 3 MCP:1000136 5 days pre-heading stage (-) 4 MCP:1000194 inflorescence 4-5cm stage (-) 5 MCP:1000201 14 days post-heading stage (-) 6 MCP:1000250 inflorescenece secondary branch primordium differentiation stage (-) 7 MCP:1000489 3 days post-anthesis stage (-) 8 MCP:1000518 seedling development stage (-) 9 PO:0007015 radicle emergence (-) 10 PO:0007022 imbibition (-) 11 PO:0007041 inflorescence emergence from flag leaf sheath (-) 12 PO:0007071 2.02 main shoot and axillary shoots visible at two nodes (-) 13 PO:0007106 LP.03 three leaves visible (-) Plant tissue/organ S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity 1 PO:0000001 embryo proper (-) 2 PO:0005052 plant callus (-) 3 PO:0006000 Poaceae hull (-) 4 PO:0009005 root (-) 5 PO:0009006 shoot system (-) 6 PO:0009010 seed (-) 7 PO:0009025 vascular leaf (-) 8 PO:0009029 stamen (-) 9 PO:0009047 stem (-) 10 PO:0009049 inflorescence (-) 11 PO:0009051 spikelet (-) 12 PO:0020031 radicle (-) 13 PO:0020032 plumule (-) 14 PO:0020103 flag leaf (-) 15 PO:0020104 leaf sheath (-) 16 PO:0025034 leaf (-) Others S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity Not found Trait details Not found Physical interaction details Interaction type: protein-protein Not found Interaction type: protein-DNA Not found Related publications [Sorted by year] 1  Nuruzzaman Mohammed; Gupta Madhur; Zhang Chengjun; Wang Lei; Xie Weibo; Xiong Lizhong; Zhang Qifa; Lian Xingming; Sequence and expression analysis of the thioredoxin protein gene family in rice. Molecular genetics and genomics 2008:280 PMID [18491141] Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India