Rice gene details Home Browse Search Contact Us Feedback Links Searching for LOC_Os12g36880 [pathogenesis-related Bet v I family protein, putative, expressed ] Basic information [Pfam DB] Graphical representation of the protein domains S. No. Locus Id Protein Length Doman Start Domain End Pfam ID Domain Name 1 LOC_Os12g36880.1 159 1 153 PF00407.11 Bet_v_I   The basic information is from RGAP and Pfam/InterPro databases Gene model (download) IR64 N22 Gene Expression (RNASeq data) in two varieties N22 & IR64 [FC=Fold Change] N22 Flag-leaf FC   3 N22InfloresenceFC   5 N22 Root FC   -1 IR64 Flag-leaf FC   2 IR64InfloresenceFC   -3 IR64 Root FC   -1 Functional details Molecular Function S. No. GO Id GO Description Biological process S. No. GO Id GO Description 1 GO:0009409 response to cold   2 GO:0009607 response to biotic stimulus   3 GO:0009620 response to fungus   4 GO:0009739 response to gibberellin stimulus   5 GO:0060992 response to fungicide   Cellular component S. No. GO Id GO Description Environment details S. No. EO Id EO Description Presence(+) or absence(-) of gene expression /activity 1 EO:0007048 sodium chloride regimen (+) 2 EO:0007069 gibberellic acid regimen (+) 3 EO:0007080 jasmonic acid regimen (+) 4 EO:0007105 abscisic acid regimen (+) 5 EO:0007187 salicylic acid regimen (+) 6 EO:0007198 water environment (+) 7 EO:0007226 Magnaporthe grisea (+) 8 EO:0007332 cold air temperature regimen (+) 9 MCE:1000044 mannitol (+) 10 MCE:1000069 dessication/dehydration stress (+) 11 MCE:1000100 probenazole (+) 12 MCE:1000268 Magnaporthe grisea race 102S (+) 13 MCE:1000269 Magnaporthe grisea race 003 (+) 14 MCE:1000275 Magnaporthe grisea strain P140 (+) 15 MCE:1000302 Xanthomonas oryzae pv. oryzicola strain RS105 (+) Metabolic Pathway details Not found QTL details Not found Plant developmental stage / tissue details Plant development stage S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity 1 MCP:1000518 seedling development stage (+) 2 PO:0001053 3 leaf fully expanded (+) 3 PO:0007014 booting (+) Plant tissue/organ S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity 1 PO:0000003 whole plant (+) 2 PO:0000005 cultured plant cell (+) 3 PO:0008037 seedling (+) 4 PO:0009005 root (+) 5 PO:0009006 shoot system (+) 6 PO:0009025 vascular leaf (+) 7 PO:0020039 leaf lamina (+) 8 PO:0025034 leaf (+) Others S. No. PO Id PO Description Presence(+) or absence(-) of gene expression /activity Not found Trait details Not found Physical interaction details Interaction type: protein-protein Not found Interaction type: protein-DNA Not found Related publications [Sorted by year] 1  Guo Lijia; Guo Chiming; Li Min; Wang Wujing; Luo Chengke; Zhang Yuxia; Chen Liang; Suppression of expression of the putative receptor-like kinase gene NRRB enhances resistance to bacterial leaf streak in rice. Molecular biology reports 2014: PMID [24420860] 2  Liu Dongfeng; Chen Xujun; Liu Jiqin; Ye Jianchun; Guo Zejian; The rice ERF transcription factor OsERF922 negatively regulates resistance to Magnaporthe oryzae and salt tolerance. Journal of Experimental Botany 2012:63 PMID [22442415] 3  Prasad Bishun Deo; Creissen Gary; Lamb Chris; Chattoo Bharat B; Overexpression of rice (Oryza sativa L.) OsCDR1 leads to constitutive activation of defense responses in rice and Arabidopsis. Molecular Plant-Microbe Interactions 2009:22 PMID [19888828] 4  Koo Sung Cheol; Choi Man Soo; Chun Hyun Jin; Shin Dong Bum; Park Bong Soo; Kim Yul Ho; Park Hyang-Mi; Seo Hak Soo; Song Jong Tae; Kang Kyu Young; Yun Dae-Jin; Chung Woo Sik; Cho Moo Je; Kim Min Chul; The calmodulin-binding transcription factor OsCBT suppresses defense responses to pathogens in rice. Molecules and cells 2009:27 PMID [19466605] 5  Zhang Juan; Peng Youliang; Guo Zejian; Constitutive expression of pathogen-inducible OsWRKY31 enhances disease resistance and affects root growth and auxin response in transgenic rice plants. Cell Research 2008:18 PMID [18071364] 6  Tanaka Naoki; Matsuoka Makoto; Kitano Hidemi; Asano Takayuki; Kaku Hisatoshi; Komatsu Setsuko; gid1, a gibberellin-insensitive dwarf mutant, shows altered regulation of probenazole-inducible protein (PBZ1) in response to cold stress and pathogen attack. Plant, Cell & Environment 2006:29 PMID [17080612] 7  Asano Takayuki; Tanaka Naoki; Yang Guangxiao; Hayashi Nagao; Komatsu Setsuko; Genome-wide identification of the rice calcium-dependent protein kinase and its closely related kinase gene families: comprehensive analysis of the CDPKs gene family in rice. Plant & Cell Physiology 2005:46 PMID [15695435] 8  Hashimoto Makoto; Kisseleva Larisa; Sawa Shinichiro; Furukawa Toshiko; Komatsu Setsuko; Koshiba Tomokazu; A novel rice PR10 protein, RSOsPR10, specifically induced in roots by biotic and abiotic stresses, possibly via the jasmonic acid signaling pathway. Plant & Cell Physiology 2004:45 PMID [15169937] 9  Xiong Lizhong; Yang Yinong; Disease resistance and abiotic stress tolerance in rice are inversely modulated by an abscisic acid-inducible mitogen-activated protein kinase. The Plant Cell 2003:15 PMID [12615946] Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi-110021, India